Gene: AT4G02260
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G02260
- Transcript Identifier AT4G02260.2
- Gene Type Coding gene
- Location Chr4 : 985451-991178 : positive
Gene Family Information
- ID HOM05D001216
- #Genes/#Species 514/99
- Phylogenetic origin
- ID ORTHO05D005688
- #Genes/#Species 153/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G02260.2
- symbol RSH1
- Alias AT-RSH1,RELA-SPOT HOMOLOG 1,ATRSH1,RELA/SPOT HOMOLOG 1
- uniprot F4JHA2
Descriptions
- Description RELA/SPOT homolog 1
- Computational description RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Computational description RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 11651 Blast hits to 11635 proteins in 2465 species: Archae - 10; Bacteria - 7456; Metazoa - 100; Fungi - 4; Plants - 211; Viruses - 4; Other Eukaryotes - 3866 (source: NCBI BLink).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015979 | IDA | Gene Ontology | photosynthesis | 1 |
| GO:0015969 | IEA | Gene Ontology | guanosine tetraphosphate metabolic process | |
| GO:0015969 | IEA | InterPro | guanosine tetraphosphate metabolic process | |
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0010150 | IMP | Gene Ontology | leaf senescence | 1 |
| GO:0009611 | IEP | Gene Ontology | response to wounding | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0008893 | IMP, IGI | Gene Ontology | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0008728 | IEA | Gene Ontology | GTP diphosphokinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA | Gene Ontology | chloroplast | 2 4 |
| GO:0005886 | ISM | Gene Ontology | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.13.3 | Multi-process regulation.ppGpp (hyperphosphorylated guanylate) signalling.ppGpp hydrolase (RSH1) |