Gene: AT4G01850
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G01850
- Transcript Identifier AT4G01850.1
- Gene Type Coding gene
- Location Chr4 : 796298-797479 : negative
Gene Family Information
- ID HOM05D001037
- #Genes/#Species 585/99
- Phylogenetic origin
- ID ORTHO05D000888
- #Genes/#Species 569/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G01850.1
- symbol SAM-2
- Alias AtSAM2,MAT2,SAM2,S-ADENOSYLMETHIONINE SYNTHETASE 2
- uniprot P17562
Descriptions
- Description S-adenosylmethionine synthetase 2
- Computational description S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: copper ion binding, methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006556 | IBA IEA | Gene Ontology | S-adenosylmethionine biosynthetic process | 1 |
GO:0006556 | IEA | InterPro | S-adenosylmethionine biosynthetic process | |
GO:0006730 | IEA | GOA Database | one-carbon metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004478 | IEA | GOA Database | methionine adenosyltransferase activity | |
GO:0004478 | IBA | Gene Ontology | methionine adenosyltransferase activity | 1 |
GO:0004478 | IEA | InterPro | methionine adenosyltransferase activity | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
GO:0005507 | HDA | Gene Ontology | copper ion binding | 3 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IDA, HDA IBA, RCA | Gene Ontology | cytosol | 1 4 5 6 |
GO:0009506 | IDA | GOA Database | plasmodesma | |
GO:0009506 | HDA | Gene Ontology | plasmodesma | 7 |
GO:0005730 | IDA | GOA Database | nucleolus | |
GO:0005730 | HDA | Gene Ontology | nucleolus | 8 |
GO:0005618 | IDA | GOA Database | cell wall | |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | ISM | Gene Ontology | cytoplasm | |
GO:0070062 | IDA | Gene Ontology | extracellular exosome | 5 |
GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 9 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
7.3.1 | Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl methionine synthetase |