Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001037', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001037' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001037' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001037' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001037' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001037', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001037' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001037' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001037' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001037' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001037', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001037' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001037' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001037' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001037' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001037', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001037' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001037', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' ) ), 'genes' => array( 'A01p36970' => 'bna', 'A03p20300' => 'bna', 'A03p31470' => 'bna', 'A03p40170' => 'bna', 'A04p28170' => 'bna', 'A05p00720' => 'bna', 'A05p08990' => 'bna', 'A09p01320' => 'bna', 'Aa31LG10G5570' => 'aar', 'Aa31LG1G10120' => 'aar', 'Aa31LG1G28420' => 'aar', 'Aa31LG5G1510' => 'aar', 'Aa31LG5G22100' => 'aar', 'Aa31LG8G4320' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2618' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2600' => 'aag', 'Actinidia02543' => 'ach', 'Actinidia06395' => 'ach', 'Actinidia16902' => 'ach', 'Actinidia26661' => 'ach', 'Actinidia28909' => 'ach', 'Actinidia32488' => 'ach', 'Actinidia35492' => 'ach', 'Ah.02g112650' => 'amhyb', 'Ah.10g027010' => 'amhyb', 'Ah.11g045810' => 'amhyb', 'AL1G11840' => 'aly', 'AL3G30460' => 'aly', 'AL4G33090' => 'aly', 'AL6G51460' => 'aly', 'Aqoxy2G02554' => 'aox', 'Aqoxy5G02780' => 'aox', 'arahy.Tifrunner.gnm1.ann1.40BQ9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Q1KS5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FJ1AK4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GLNG4N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I49WQS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LGSY73' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P6SB2Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PNM9T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5YED' => 'arhy', 'AT1G02500' => 'ath', 'AT2G36880' => 'ath', 'AT3G17390' => 'ath', 'AT4G01850' => 'ath', 'ATR0706G033' => 'atr', 'ATR0796G156' => 'atr', 'AUR62000463' => 'cqu', 'AUR62006803' => 'cqu', 'AUR62011730' => 'cqu', 'AUR62024564' => 'cqu', 'BcaB01g02107' => 'bca', 'BcaB01g02108' => 'bca', 'BcaB01g02109' => 'bca', 'BcaB01g02380' => 'bca', 'BcaB01g03811' => 'bca', 'BcaB02g08803' => 'bca', 'BcaB02g09325' => 'bca', 'BcaB04g18940' => 'bca', 'BcaB04g20846' => 'bca', 'BcaB06g28957' => 'bca', 'BcaC01g03767' => 'bca', 'BcaC01g05637' => 'bca', 'BcaC01g06801' => 'bca', 'BcaC02g07573' => 'bca', 'BcaC02g09024' => 'bca', 'BcaC02g11811' => 'bca', 'BcaC04g24070' => 'bca', 'BcaC09g48694' => 'bca', 'BcaC09g48695' => 'bca', 'BolC1t04659H' => 'bol', 'BolC3t16119H' => 'bol', 'BolC3t17161H' => 'bol', 'BolC4t21726H' => 'bol', 'BolC4t22758H' => 'bol', 'BolC4t28044H' => 'bol', 'BolC9t53071H' => 'bol', 'BraA01t03757Z' => 'bra', 'BraA03t11276Z' => 'bra', 'BraA03t12327Z' => 'bra', 'BraA03t13167Z' => 'bra', 'BraA04t18303Z' => 'bra', 'BraA05t19076Z' => 'bra', 'BraA05t19861Z' => 'bra', 'BraA09t35797Z' => 'bra', 'C01p46870' => 'bna', 'C03p23830' => 'bna', 'C03p38460' => 'bna', 'C03p48790' => 'bna', 'C04p00880' => 'bna', 'C04p11100' => 'bna', 'C04p65550' => 'bna', 'C09p01370' => 'bna', 'CAN.G1374.18' => 'can', 'CAN.G484.85' => 'can', 'CAN.G488.13' => 'can', 'CAN.G900.24' => 'can', 'CANSAT25G1228' => 'cansat', 'CANSAT54G1878' => 'cansat', 'CANSAT80G1667' => 'cansat', 'CARHR001810' => 'chi', 'CARHR092710' => 'chi', 'CARHR131330' => 'chi', 'CARHR142440' => 'chi', 'CARHR249810' => 'chi', 'Carub.0001s0156' => 'cru', 'Carub.0003s1712' => 'cru', 'Carub.0004s1872' => 'cru', 'Carub.0004s2982' => 'cru', 'Carub.0006s3539' => 'cru', 'Ca_02373_v3' => 'car', 'Ca_08887_v3' => 'car', 'Ca_08908_v3' => 'car', 'Ca_09237_v3' => 'car', 'Ca_21385_v3' => 'car', 'CBR_g1006' => 'cbr', 'CBR_g17113' => 'cbr', 'CBR_g19628' => 'cbr', 'CBR_g38099' => 'cbr', 'CBR_g49387' => 'cbr', 'CBR_g49389' => 'cbr', 'CBR_g49394' => 'cbr', 'CBR_g49395' => 'cbr', 'CBR_g49396' => 'cbr', 'CBR_g50962' => 'cbr', 'CBR_g50963' => 'cbr', 'CBR_g50964' => 'cbr', 'CBR_g52619' => 'cbr', 'Cc02_g35660' => 'ccan', 'Cc03_g00230' => 'ccan', 'Cc06_g04330' => 'ccan', 'Cc08_g06490' => 'ccan', 'CDE02G1498' => 'cde', 'CDE02G3464' => 'cde', 'CDE05G0584' => 'cde', 'CDE08G0195' => 'cde', 'CDE09G1010' => 'cde', 'Cfa004882' => 'cfa', 'Cfa015719' => 'cfa', 'Cfa017629' => 'cfa', 'Cfa025036' => 'cfa', 'Ciclev10005146m.g' => 'ccl', 'Ciclev10011912m.g' => 'ccl', 'Ciclev10020504m.g' => 'ccl', 'Ciclev10028614m.g' => 'ccl', 'CiPaw.01G130600' => 'cil', 'CiPaw.07G034900' => 'cil', 'CiPaw.07G123700' => 'cil', 'CiPaw.08G084500' => 'cil', 'CiPaw.09G171500' => 'cil', 'ClCG04G009340' => 'cla', 'ClCG04G009360' => 'cla', 'ClCG09G004630' => 'cla', 'ClCG10G011810' => 'cla', 'COL.COLO4_05506' => 'col', 'COL.COLO4_26946' => 'col', 'COL.COLO4_34547' => 'col', 'Cpa.g.sc102.23' => 'cpa', 'Cpa.g.sc146.36' => 'cpa', 'Cpa.g.sc48.212' => 'cpa', 'Cpa.g.sc67.71' => 'cpa', 'Cre06.g250200' => 'cre', 'CsaV3_6G039940' => 'csa', 'CsaV3_7G030460' => 'csa', 'CsaV3_7G030490' => 'csa', 'CSS0005939' => 'camsi', 'CSS0008561' => 'camsi', 'CSS0014929' => 'camsi', 'CSS0016252' => 'camsi', 'CSS0037881' => 'camsi', 'CSS0041489' => 'camsi', 'DCAR_002546' => 'dca', 'DCAR_012307' => 'dca', 'DCAR_012308' => 'dca', 'DCAR_018249' => 'dca', 'DCAR_024999' => 'dca', 'DCAR_025301' => 'dca', 'DCAR_026957' => 'dca', 'DCAR_029829' => 'dca', 'DCAR_030427' => 'dca', 'Dinv12095' => 'din', 'Dinv18031' => 'din', 'Dinv24500' => 'din', 'Dinv29522' => 'din', 'Dinv30936' => 'din', 'Dinv33160' => 'din', 'Dinv35792' => 'din', 'Dinv37321' => 'din', 'Duzib093G1816' => 'dzi', 'Duzib106G0152' => 'dzi', 'Duzib128G1363' => 'dzi', 'Duzib133G1027' => 'dzi', 'Duzib138G0697' => 'dzi', 'Duzib151G0464' => 'dzi', 'Duzib212G0851' => 'dzi', 'Duzib212G0917' => 'dzi', 'ECA233G2397' => 'eca', 'ECA233G5701' => 'eca', 'ECA238G3966' => 'eca', 'ECA246G0624' => 'eca', 'ECA248G1419' => 'eca', 'EL10Ac4g09541' => 'bvu', 'EL10As5g23610' => 'bvu', 'Eucgr.A01021' => 'egr', 'Eucgr.H04112' => 'egr', 'Eucgr.J00368' => 'egr', 'Eucgr.J00370' => 'egr', 'Eucgr.J00373' => 'egr', 'Eucgr.J00380' => 'egr', 'Eucgr.K00588' => 'egr', 'FAN02G0324' => 'fan', 'FAN02G0671' => 'fan', 'FAN02G1446' => 'fan', 'FAN02G2759' => 'fan', 'FAN05G0352' => 'fan', 'FAN05G2822' => 'fan', 'FAN05G3191' => 'fan', 'FAN05G3665' => 'fan', 'FAN07G2940' => 'fan', 'FAN09G1304' => 'fan', 'FAN09G1398' => 'fan', 'FAN09G2211' => 'fan', 'FAN12G3079' => 'fan', 'FAN14G0963' => 'fan', 'FAN14G3116' => 'fan', 'FAN15G1174' => 'fan', 'FAN17G3010' => 'fan', 'FAN19G1013' => 'fan', 'FAN23G2974' => 'fan', 'FAN26G1423' => 'fan', 'FAN28G2858' => 'fan', 'FvH4_1g26460' => 'fve', 'FvH4_4g21340' => 'fve', 'FvH4_6g08370' => 'fve', 'FvH4_6g09200' => 'fve', 'FvH4_6g09220' => 'fve', 'FvH4_6g16510' => 'fve', 'Glyma.03G184000' => 'gma', 'Glyma.03G223000' => 'gma', 'Glyma.07G233800' => 'gma', 'Glyma.10G054500' => 'gma', 'Glyma.10G144300' => 'gma', 'Glyma.13G141600' => 'gma', 'Glyma.15G190500' => 'gma', 'Glyma.17G039000' => 'gma', 'Glyma.17G039100' => 'gma', 'Glyma.19G184700' => 'gma', 'Glyma.19G220200' => 'gma', 'Gohir.A02G057600' => 'ghi', 'Gohir.A04G071900' => 'ghi', 'Gohir.A08G121100' => 'ghi', 'Gohir.A09G145900' => 'ghi', 'Gohir.A11G106400' => 'ghi', 'Gohir.A11G323900' => 'ghi', 'Gohir.A12G121100' => 'ghi', 'Gohir.D02G063400' => 'ghi', 'Gohir.D04G110400' => 'ghi', 'Gohir.D07G135100' => 'ghi', 'Gohir.D08G142400' => 'ghi', 'Gohir.D09G141700' => 'ghi', 'Gohir.D11G111300' => 'ghi', 'Gohir.D11G343000' => 'ghi', 'Gohir.D12G124900' => 'ghi', 'Gorai.001G146800' => 'gra', 'Gorai.004G146800' => 'gra', 'Gorai.005G071300' => 'gra', 'Gorai.006G162700' => 'gra', 'Gorai.007G119200' => 'gra', 'Gorai.007G373100' => 'gra', 'Gorai.008G135900' => 'gra', 'Gorai.009G414500' => 'gra', 'GSVIVG01017675001' => 'vvi', 'GSVIVG01028205001' => 'vvi', 'GSVIVG01031313001' => 'vvi', 'GSVIVG01031492001' => 'vvi', 'GSVIVG01033651001' => 'vvi', 'HanXRQChr01g0027791' => 'han', 'HanXRQChr01g0027801' => 'han', 'HanXRQChr02g0051721' => 'han', 'HanXRQChr05g0148381' => 'han', 'HanXRQChr07g0194741' => 'han', 'HanXRQChr08g0212171' => 'han', 'HanXRQChr13g0400841' => 'han', 'HanXRQChr14g0454811' => 'han', 'Haze_00793' => 'cav', 'Haze_04001' => 'cav', 'Haze_05121' => 'cav', 'Haze_20524' => 'cav', 'Haze_26137' => 'cav', 'Hma1.2p1_0052F.1_g030460' => 'hma', 'Hma1.2p1_0828F.1_g225110' => 'hma', 'HPP92_002623' => 'vpl', 'HPP92_010593' => 'vpl', 'HPP92_010875' => 'vpl', 'HPP92_012771' => 'vpl', 'HPP92_017302' => 'vpl', 'Hund11633' => 'sun', 'Hund27714' => 'sun', 'Hund27718' => 'sun', 'Lalb_Chr01g0018661' => 'lal', 'Lalb_Chr04g0260141' => 'lal', 'Lalb_Chr06g0171781' => 'lal', 'Lalb_Chr07g0181781' => 'lal', 'Lalb_Chr08g0233061' => 'lal', 'Lalb_Chr08g0233071' => 'lal', 'Lalb_Chr11g0073501' => 'lal', 'Lalb_Chr12g0200681' => 'lal', 'Lalb_Chr13g0298861' => 'lal', 'Lalb_Chr20g0112591' => 'lal', 'Lalb_Chr21g0310101' => 'lal', 'Lalb_Chr21g0315041' => 'lal', 'Lj1C10T11' => 'lonja', 'Lj1g0003155' => 'lja', 'Lj1g0007880' => 'lja', 'Lj1g0027450' => 'lja', 'Lj2P120T33' => 'lonja', 'Lj3P839T38' => 'lonja', 'Lj3P987T14' => 'lonja', 'Lj4g0001311' => 'lja', 'Lj5g0020212' => 'lja', 'Lj5P321T34' => 'lonja', 'Lj6g0002282' => 'lja', 'LjContig00141g0012605' => 'lja', 'Lju99C7T12' => 'lonja', 'Lsat_1_v5_gn_1_51641' => 'lsa', 'Lsat_1_v5_gn_2_107260' => 'lsa', 'Lsat_1_v5_gn_4_87140' => 'lsa', 'Lsat_1_v5_gn_6_117861' => 'lsa', 'Lsat_1_v5_gn_6_24520' => 'lsa', 'Lsat_1_v5_gn_6_71400' => 'lsa', 'Manes.01G233200' => 'mes', 'Manes.04G014500' => 'mes', 'Manes.05G010500' => 'mes', 'Manes.08G011500' => 'mes', 'Manes.08G108200' => 'mes', 'Manes.09G065200' => 'mes', 'Mapoly0063s0075' => 'mpo', 'Mapoly0657s0001' => 'mpo', 'MBI18_g09626_MAGBIO' => 'mbi', 'MBI19_g32718_MAGBIO' => 'mbi', 'MBI19_g32720_MAGBIO' => 'mbi', 'MCO06G182' => 'mco', 'MD04G1091900' => 'mdo', 'MD04G1187700' => 'mdo', 'MD09G1292700' => 'mdo', 'MD12G1109900' => 'mdo', 'MD12G1201100' => 'mdo', 'MD13G1141700' => 'mdo', 'MD16G1138300' => 'mdo', 'MD17G1283400' => 'mdo', 'Medtr1g063060' => 'mtr', 'Medtr2g046710' => 'mtr', 'Medtr4g123810' => 'mtr', 'Medtr7g102120' => 'mtr', 'Medtr7g110310' => 'mtr', 'MELO3C012911.2' => 'cme', 'MELO3C023606.2' => 'cme', 'MELO3C024471.2' => 'cme', 'Migut.B00863' => 'egut', 'Migut.J00647' => 'egut', 'Migut.L01709' => 'egut', 'Migut.N02568' => 'egut', 'MSTRG.10327' => 'ama', 'MSTRG.16418' => 'ama', 'MSTRG.20365' => 'ama', 'MSTRG.26690' => 'ama', 'Nitab4.5_0000063g0120' => 'nta', 'Nitab4.5_0000155g0200' => 'nta', 'Nitab4.5_0000578g0090' => 'nta', 'Nitab4.5_0000745g0170' => 'nta', 'Nitab4.5_0000814g0090' => 'nta', 'Nitab4.5_0000895g0150' => 'nta', 'Nitab4.5_0001931g0120' => 'nta', 'Nitab4.5_0002115g0020' => 'nta', 'Nitab4.5_0002869g0010' => 'nta', 'Nitab4.5_0003524g0020' => 'nta', 'Nitab4.5_0004665g0010' => 'nta', 'Nitab4.5_0006589g0020' => 'nta', 'Nitab4.5_0008312g0060' => 'nta', 'Nitab4.5_0008624g0040' => 'nta', 'Nn2g13810' => 'nnu', 'Nn3g21886' => 'nnu', 'Nn4g25405' => 'nnu', 'Nn6g35271' => 'nnu', 'Oeu000086.1' => 'oeu', 'Oeu000087.1' => 'oeu', 'Oeu005027.1' => 'oeu', 'Oeu013539.1' => 'oeu', 'Oeu027968.9' => 'oeu', 'Oeu030888.1' => 'oeu', 'Oeu036642.1' => 'oeu', 'Oeu044757.4' => 'oeu', 'Oeu045233.2' => 'oeu', 'Oeu052580.1' => 'oeu', 'Oeu055274.1' => 'oeu', 'Oeu056535.1' => 'oeu', 'Os01g0207300' => 'osa', 'Os01g0293000' => 'osa', 'Os01g0323600' => 'osa', 'Os05g0135700' => 'osa', 'Os07g0477250' => 'osa', 'Peaxi162Scf00071g00324' => 'pax', 'Peaxi162Scf00164g00055' => 'pax', 'Peaxi162Scf00311g00131' => 'pax', 'Peaxi162Scf00357g00318' => 'pax', 'Peaxi162Scf00578g00014' => 'pax', 'Peaxi162Scf00668g00049' => 'pax', 'Peaxi162Scf01081g00002' => 'pax', 'PGR004G2895' => 'pgr', 'PGR031G0342' => 'pgr', 'PGR031G0860' => 'pgr', 'PGR031G2021' => 'pgr', 'PGR042G1901' => 'pgr', 'PGR142G1016' => 'pgr', 'PGR142G3025' => 'pgr', 'PGSC0003DMG400004688' => 'stu', 'PGSC0003DMG400018292' => 'stu', 'PGSC0003DMG400028287' => 'stu', 'PGSC0003DMG400037250' => 'stu', 'Phvul.001G179500' => 'pvu', 'Phvul.001G216600' => 'pvu', 'Phvul.001G216700' => 'pvu', 'Phvul.001G222800' => 'pvu', 'Phvul.003G120000' => 'pvu', 'Phvul.003G120201' => 'pvu', 'Phvul.003G120300' => 'pvu', 'Phvul.007G148000' => 'pvu', 'Phvul.007G148100' => 'pvu', 'Phvul.007G210700' => 'pvu', 'Potri.002G189200' => 'ptr', 'Potri.006G123200' => 'ptr', 'Potri.008G099300' => 'ptr', 'Potri.010G153500' => 'ptr', 'Potri.013G004100' => 'ptr', 'Potri.014G114700' => 'ptr', 'Pp3c12_19590' => 'ppa', 'Pp3c19_3030' => 'ppa', 'Pp3c19_3060' => 'ppa', 'Pp3c22_12780' => 'ppa', 'Pp3c22_12800' => 'ppa', 'Pp3c22_12850' => 'ppa', 'Pp3c2_21320' => 'ppa', 'PRCOL_00006359' => 'pco', 'Prupe.1G107000' => 'ppe', 'Prupe.3G004000' => 'ppe', 'Prupe.6G306200' => 'ppe', 'Prupe.7G128500' => 'ppe', 'Psat0ss1196g0320' => 'psa', 'Psat1g018040' => 'psa', 'Psat2g133400' => 'psa', 'Psat2g133440' => 'psa', 'Psat3g018200' => 'psa', 'Psat3g042160' => 'psa', 'Psat6g074640' => 'psa', 'Psat6g108320' => 'psa', 'PSO063G0937' => 'pso', 'PSO081G0132' => 'pso', 'PSO210G4530' => 'pso', 'PSO339G3150' => 'pso', 'PSO339G4475' => 'pso', 'PSO357G0324' => 'pso', 'PSO761G0021' => 'pso', 'PSO782G5757' => 'pso', 'PSO801G0288' => 'pso', 'PSO832G2268' => 'pso', 'QL03p009633' => 'qlo', 'QL06p013885' => 'qlo', 'QL07p043065' => 'qlo', 'QL12p034384' => 'qlo', 'QL93p1872_0060' => 'qlo', 'RcHm_v2.0_Chr3g0458271' => 'rch', 'RcHm_v2.0_Chr3g0470421' => 'rch', 'RcHm_v2.0_Chr3g0486231' => 'rch', 'RcHm_v2.0_Chr4g0427101' => 'rch', 'Rhsim01G0202200' => 'rsi', 'Rhsim03G0090800' => 'rsi', 'Rhsim05G0121700' => 'rsi', 'Rhsim11G0100300' => 'rsi', 'Rhsim13G0000600' => 'rsi', 'Sabra02G0166400' => 'sbr', 'Sabra06G0097500' => 'sbr', 'Sabra08G0075000' => 'sbr', 'Sabra10G0118100' => 'sbr', 'Sabra13G0003200' => 'sbr', 'Sabra14G0084700' => 'sbr', 'SalBow3G0741' => 'sbo', 'SalBow3G2095' => 'sbo', 'SalBow3G2743' => 'sbo', 'SalBow3G4627' => 'sbo', 'SalBow5G1830' => 'sbo', 'SalBow5G2856' => 'sbo', 'SalBow6G6212' => 'sbo', 'SalBow7G3996' => 'sbo', 'Sc02g0001590' => 'sci', 'Sc05g0000140' => 'sci', 'Sc09g0002460' => 'sci', 'Sc16g0009330' => 'sci', 'Sc17g0000140' => 'sci', 'Sc20g0005560' => 'sci', 'Sed0001681' => 'sed', 'Sed0004164' => 'sed', 'Sed0019541' => 'sed', 'Sed0022550' => 'sed', 'Sed0026886' => 'sed', 'SEGI_10141' => 'sgi', 'SEGI_17927' => 'sgi', 'SEGI_18680' => 'sgi', 'SEGI_19213' => 'sgi', 'SEGI_38408' => 'sgi', 'SEGI_39059' => 'sgi', 'SGA_v2.0_scaffold35G14117' => 'sas', 'SGA_v2.0_scaffold40G15490' => 'sas', 'SGA_v2.0_scaffold64G22035' => 'sas', 'SGA_v2.0_scaffold75G24835' => 'sas', 'SHI34032' => 'shi', 'SMO235G0047' => 'smo', 'SMO347G0015' => 'smo', 'SMO363G0002' => 'smo', 'SMO364G0510' => 'smo', 'Solyc01g101060.4' => 'sly', 'Solyc04g049200.3' => 'sly', 'Solyc09g008280.2' => 'sly', 'Solyc10g083970.1' => 'sly', 'Solyc12g099000.3' => 'sly', 'Sopen01g044520' => 'spe', 'Sopen09g003100' => 'spe', 'Sopen10g033420' => 'spe', 'Sopen12g033740' => 'spe', 'Sp3g15570' => 'spa', 'Sp4g19160' => 'spa', 'Sp4g29070' => 'spa', 'Sp6g01690' => 'spa', 'TAR362G0105' => 'tar', 'TAR365G0085' => 'tar', 'TAR633G0092' => 'tar', 'TAR633G0890' => 'tar', 'TAR636G0562' => 'tar', 'TAR636G2232' => 'tar', 'THA.LOC104802127' => 'tha', 'THA.LOC104802614' => 'tha', 'THA.LOC104805216' => 'tha', 'THA.LOC104816353' => 'tha', 'THA.LOC104817440' => 'tha', 'THA.LOC104825929' => 'tha', 'THA.LOC104826917' => 'tha', 'THA.LOC104827655' => 'tha', 'Thecc.01G322800' => 'tca', 'Thecc.04G311300' => 'tca', 'Thecc.05G068700' => 'tca', 'Thecc.05G328200' => 'tca', 'Thhalv10001487m.g' => 'esa', 'Thhalv10007845m.g' => 'esa', 'Thhalv10016774m.g' => 'esa', 'Thhalv10020887m.g' => 'esa', 'Thhalv10027815m.g' => 'esa', 'Thhalv10028715m.g' => 'esa', 'TPR.G11273' => 'tpr', 'TPR.G12570' => 'tpr', 'TPR.G32802' => 'tpr', 'TPR.G35368' => 'tpr', 'TPR.G4081' => 'tpr', 'TWI14G0259' => 'twi', 'TWI23G0279' => 'twi', 'TWI53G0180' => 'twi', 'TWI59G0876' => 'twi', 'TWI74G0039' => 'twi', 'unitig_42.g32300' => 'ugi', 'unitig_52.g17268' => 'ugi', 'unitig_699.g19660' => 'ugi', 'unitig_736.g22778' => 'ugi', 'unitig_746.g26766' => 'ugi', 'unitig_8.g2884' => 'ugi', 'unitig_899.g14751' => 'ugi', 'unitig_899.g15218' => 'ugi', 'vmacro02085' => 'vma', 'vmacro02086' => 'vma', 'vmacro02087' => 'vma', 'VMungo0720G2120' => 'vmu', 'VMungo0720G3097' => 'vmu', 'VMungo1127G1875' => 'vmu', 'Zm00001eb130870' => 'zma', 'Zm00001eb332180' => 'zma', 'Zm00001eb340450' => 'zma', 'Zm00001eb354640' => 'zma', 'Zm00001eb417370' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001037' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001037' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001037' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001037' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151