Gene: AT4G01023

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01023
  • Transcript Identifier AT4G01023.3
  • Gene Type Coding gene
  • Location Chr4 : 445492-446835 : positive

Gene Family Information

  • ID HOM05D003601
  • #Genes/#Species 190/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01023.3
  • uniprot F4JHR1

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT5G06420.2); Has 1605 Blast hits to 1547 proteins in 476 species: Archae - 6; Bacteria - 22; Metazoa - 955; Fungi - 207; Plants - 131; Viruses - 8; Other Eukaryotes - 276 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034247
IBA
Gene OntologysnoRNA splicing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
ISO
PLAZA Homology (enrichment)metal ion binding HOM05D003601

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005684
IBA
Gene OntologyU2-type spliceosomal complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR039971 Pre-mRNA-splicing factor CWC24-like
Mapman id Description
35.1 not assigned.annotated