Gene: AT4G00840
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G00840
- Transcript Identifier AT4G00840.1
- Gene Type Coding gene
- Location Chr4 : 355483-357105 : negative
Gene Family Information
- ID HOM05D000968
- #Genes/#Species 618/100
- Phylogenetic origin
- ID ORTHO05D001687
- #Genes/#Species 370/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G00840.1
- uniprot Q5M757
Descriptions
- Description DHHC-type zinc finger family protein
- Computational description DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0018230 | IBA | Gene Ontology | peptidyl-L-cysteine S-palmitoylation | 1 |
| GO:0006612 | IBA | Gene Ontology | protein targeting to membrane | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019706 | IBA IEA | Gene Ontology | protein-cysteine S-palmitoyltransferase activity | 1 |
| GO:0016746 | IEA | GOA Database | acyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016409 | IEA | GOA Database | palmitoyltransferase activity | |
| GO:0016409 | IEA | InterPro | palmitoyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005783 | IBA | Gene Ontology | endoplasmic reticulum | 1 |
| GO:0005794 | IBA | Gene Ontology | Golgi apparatus | 1 |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001594 | Palmitoyltransferase, DHHC domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |