Gene: AT3G62410
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G62410
- Transcript Identifier AT3G62410.1
- Gene Type Coding gene
- Location Chr3 : 23091006-23091401 : positive
Gene Family Information
- ID HOM05D002371
- #Genes/#Species 287/94
- Phylogenetic origin
- ID ORTHO05D002397
- #Genes/#Species 291/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G62410.1
- symbol CP12-2
- Alias CP12,CP12 DOMAIN-CONTAINING PROTEIN 1
- uniprot Q9LZP9
Descriptions
- Description CP12 domain-containing protein 2
- Computational description CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0080153 | IDA IBA | Gene Ontology | negative regulation of reductive pentose-phosphate cycle | 1 2 |
GO:0065003 | IDA, IMP | GOA Database | protein-containing complex assembly | |
GO:0019253 | IEA | GOA Database | reductive pentose-phosphate cycle | |
GO:0019253 | TAS | Gene Ontology | reductive pentose-phosphate cycle | 3 |
GO:0031334 | ISO | PLAZA Integrative Orthology | positive regulation of protein-containing complex assembly | Cre08.g380250 |
GO:0071454 | IEP | Gene Ontology | cellular response to anoxia | 4 |
GO:0070417 | IEP | Gene Ontology | cellular response to cold | 4 |
GO:0034605 | IEP | Gene Ontology | cellular response to heat | 4 |
GO:0018316 | TAS | Gene Ontology | peptide cross-linking via L-cystine | 3 |
GO:0009744 | IEP | Gene Ontology | response to sucrose | 3 |
GO:0009416 | IEP | Gene Ontology | response to light stimulus | 3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0044877 | IDA, IPI | GOA Database | protein-containing complex binding | |
GO:0030674 | IPI | GOA Database | protein-macromolecule adaptor activity | |
GO:0019899 | IPI | GOA Database | enzyme binding | |
GO:0005507 | ISS | Gene Ontology | copper ion binding | |
GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
GO:0016151 | ISS | Gene Ontology | nickel cation binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0099080 | IDA, IMP | GOA Database | supramolecular complex | |
GO:0005829 | HDA | Gene Ontology | cytosol | 6 |
GO:0009507 | IEA | GOA Database | chloroplast | |
GO:0009507 | IDA, HDA ISM, IBA | Gene Ontology | chloroplast | 1 2 7 |
GO:0009570 | IDA | GOA Database | chloroplast stroma | |
GO:0009570 | HDA ISS | Gene Ontology | chloroplast stroma | 3 8 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0032991 | IDA | Gene Ontology | protein-containing complex | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |