Gene: AT3G61530
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G61530
- Transcript Identifier AT3G61530.2
- Gene Type Coding gene
- Location Chr3 : 22771692-22773313 : negative
Gene Family Information
- ID HOM05D004048
- #Genes/#Species 173/97
- Phylogenetic origin
- ID ORTHO05D004859
- #Genes/#Species 169/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G61530.2
- symbol PANB2
- uniprot Q9M315
Descriptions
- Description Phosphoenolpyruvate carboxylase family protein
- Computational description PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 7570 Blast hits to 7570 proteins in 2036 species: Archae - 128; Bacteria - 4151; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3088 (source: NCBI BLink).
- Computational description PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015940 | IGI IBA IEA | Gene Ontology | pantothenate biosynthetic process | 1 2 |
| GO:0015940 | IEA | InterPro | pantothenate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0003864 | IEA | GOA Database | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | |
| GO:0003864 | IGI IBA | Gene Ontology | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 1 2 |
| GO:0003864 | IEA | InterPro | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0008270 | IDA | GOA Database | zinc ion binding | |
| GO:0008270 | HDA | Gene Ontology | zinc ion binding | 3 |
| GO:0050897 | IDA | GOA Database | cobalt ion binding | |
| GO:0050897 | HDA | Gene Ontology | cobalt ion binding | 3 |
| GO:0000287 | IBA | Gene Ontology | magnesium ion binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA IBA | Gene Ontology | mitochondrion | 1 2 |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.4.1.1 | Coenzyme metabolism.coenzyme A biosynthesis.pantothenate biosynthesis.ketopantoate hydroxymethyltransferase |