Gene: AT3G60950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G60950
  • Transcript Identifier AT3G60950.1
  • Gene Type Coding gene
  • Location Chr3 : 22524475-22529770 : positive

Gene Family Information

  • ID HOM05D000524
  • #Genes/#Species 1038/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G60950.1
  • uniprot F4JD16

Descriptions

  • Description C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
  • Computational description C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 4425 Blast hits to 4326 proteins in 1442 species: Archae - 111; Bacteria - 2322; Metazoa - 578; Fungi - 318; Plants - 452; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006869
IEA
GOA Databaselipid transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
ISM
Gene Ontologyplasma membrane1
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum2
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR045050 Synaptotagmin, plant
IPR035892 C2 domain superfamily
IPR000008 C2 domain
IPR039010 Synaptotagmin, SMP domain
Mapman id Description
50.4.2 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase