Gene: AT3G59950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59950
  • Transcript Identifier AT3G59950.1
  • Gene Type Coding gene
  • Location Chr3 : 22144468-22146887 : negative

Gene Family Information

  • ID HOM05D004013
  • #Genes/#Species 174/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59950.1
  • uniprot Q9M1Y0

Descriptions

  • Description Peptidase family C54 protein
  • Computational description Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 844 Blast hits to 806 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 426; Fungi - 182; Plants - 81; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006914
IEA
GOA Databaseautophagy
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR005078 Peptidase C54
Mapman id Description
19.3.3.4.2 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ATG8-maturation peptidase (ATG4)