Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G59950 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 3.1e-276 954.5 478 100.0
AL5G42130 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 6.2e-261 903.7 478 95.6
Sp5g03230 Schrenkiella parvula HOM05D004013 ORTHO05D004710 6.0e-240 833.9 478 88.7
Carub.0005s2667 Capsella rubella HOM05D004013 ORTHO05D004710 2.1e-229 798.9 465 87.7
CARHR170260 Cardamine hirsuta HOM05D004013 ORTHO05D004710 3.3e-214 748.4 422 89.3
BcaC07g40400 Brassica carinata HOM05D004013 ORTHO05D004710 8.2e-213 743.8 478 80.8
BraA09t40658Z Brassica rapa HOM05D004013 ORTHO05D004710 5.3e-212 741.1 478 81.2
C04p32840 Brassica napus HOM05D004013 ORTHO05D004710 1.9e-209 732.6 480 79.0
BcaC02g10096 Brassica carinata HOM05D004013 ORTHO05D004710 4.2e-209 731.5 480 79.0
BolC4t24846H Brassica oleracea HOM05D004013 ORTHO05D004710 4.2e-209 731.5 480 79.0
A09p52290 Brassica napus HOM05D004013 ORTHO05D004710 7.9e-208 727.2 503 77.1
Thhalv10005940m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 6.9e-204 714.1 392 89.8
BcaB02g08204 Brassica carinata HOM05D004013 ORTHO05D004710 9.1e-204 713.8 392 89.8
BolC8t51099H Brassica oleracea HOM05D004013 ORTHO05D004710 1.5e-203 713.0 486 78.2
Sp4g26220 Schrenkiella parvula HOM05D004013 ORTHO05D004710 3.6e-200 701.8 478 73.4
A04p01980 Brassica napus HOM05D004013 ORTHO05D004710 6.1e-200 701.0 481 76.7
Aa31LG1G25800 Aethionema arabicum HOM05D004013 ORTHO05D004710 1.0e-199 700.3 487 73.9
AL4G43020 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 1.0e-199 700.3 481 73.2
BraA04t15923Z Brassica rapa HOM05D004013 ORTHO05D004710 5.1e-199 698.0 480 76.0
AT2G44140 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 4.8e-197 691.4 478 73.0
BcaC07g40539 Brassica carinata HOM05D004013 ORTHO05D004710 1.2e-187 660.2 392 85.2
CARHR139300 Cardamine hirsuta HOM05D004013 ORTHO05D004710 3.1e-180 635.6 432 72.2
BcaB02g08917 Brassica carinata HOM05D004013 ORTHO05D004710 9.1e-180 634.0 484 68.4
BcaC02g12335 Brassica carinata HOM05D004013 ORTHO05D004710 1.0e-175 620.5 485 68.7
C04p05030 Brassica napus HOM05D004013 ORTHO05D004710 1.0e-175 620.5 485 68.7
BolC4t22136H Brassica oleracea HOM05D004013 ORTHO05D004710 1.0e-175 620.5 485 68.7
A05p04250 Brassica napus HOM05D004013 ORTHO05D004710 1.5e-174 616.7 487 68.6
BraA05t19410Z Brassica rapa HOM05D004013 ORTHO05D004710 3.4e-174 615.5 487 68.4
Carub.0004s2669 Capsella rubella HOM05D004013 ORTHO05D004710 4.1e-172 608.6 395 75.2
Thhalv10001432m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 3.4e-166 589.0 395 73.9
QL05p046231 Quercus lobata HOM05D004013 ORTHO05D004710 1.9e-156 556.6 502 56.8
Cpa.g.sc9.235 Carica papaya HOM05D004013 ORTHO05D004710 2.4e-156 556.2 405 67.4
Thecc.01G234100 Theobroma cacao HOM05D004013 ORTHO05D004710 2.4e-156 556.2 488 58.2
CiPaw.10G057600 Carya illinoinensis HOM05D004013 ORTHO05D004710 4.1e-156 555.4 495 58.0
Prupe.2G000200 Prunus persica HOM05D004013 ORTHO05D004710 9.2e-156 554.3 491 57.4
Atru.chr3.2025 Acer truncatum HOM05D004013 ORTHO05D004710 1.2e-155 553.9 492 59.3
Cfa000589 Carpinus fangiana HOM05D004013 ORTHO05D004710 1.2e-155 553.9 503 57.3
GSVIVG01003913001 Vitis vinifera HOM05D004013 ORTHO05D004710 2.0e-155 553.1 496 58.7
Gorai.008G001300 Gossypium raimondii HOM05D004013 ORTHO05D004710 3.0e-154 549.3 498 59.4
MD00G1055200 Malus domestica HOM05D004013 ORTHO05D004710 3.0e-154 549.3 491 57.4
Duzib147G1378 Durio zibethinus HOM05D004013 ORTHO05D004710 6.6e-154 548.1 494 58.5
Gohir.D12G001900 Gossypium hirsutum HOM05D004013 ORTHO05D004710 6.6e-154 548.1 498 59.0
Dinv28066 Davidia involucrata HOM05D004013 ORTHO05D004710 2.5e-153 546.2 489 57.3
Gohir.A12G002200 Gossypium hirsutum HOM05D004013 ORTHO05D004710 4.3e-153 545.4 498 58.8
Phvul.008G048900 Phaseolus vulgaris HOM05D004013 ORTHO05D004710 9.5e-153 544.3 494 56.1
Potri.017G000500 Populus trichocarpa HOM05D004013 ORTHO05D004710 3.6e-152 542.3 485 59.2
Duzib264G0158 Durio zibethinus HOM05D004013 ORTHO05D004710 6.2e-152 541.6 490 58.2
Potri.007G147100 Populus trichocarpa HOM05D004013 ORTHO05D004710 1.4e-151 540.4 487 58.3
Glyma.09G244800 Glycine max HOM05D004013 ORTHO05D004710 3.1e-151 539.3 499 56.3
MD07G1000400 Malus domestica HOM05D004013 ORTHO05D004710 4.0e-151 538.9 491 56.6
Lj1g0014615 Lotus japonicus HOM05D004013 ORTHO05D004710 8.9e-151 537.7 489 57.1
Medtr7g081230 Medicago truncatula HOM05D004013 ORTHO05D004710 1.2e-150 537.3 488 56.4
VMungo1383G0353 Vigna mungo HOM05D004013 ORTHO05D004710 2.0e-150 536.6 494 55.5
Ciclev10019906m.g Citrus clementina HOM05D004013 ORTHO05D004710 7.5e-150 534.6 489 56.4
Eucgr.K03157 Eucalyptus grandis HOM05D004013 ORTHO05D004710 2.2e-149 533.1 491 57.4
TPR.G29111 Trifolium pratense HOM05D004013 ORTHO05D004710 2.2e-149 533.1 489 55.8
Ca_08048_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 2.9e-149 532.7 491 55.0
Ca_08054_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 2.9e-149 532.7 491 55.0
TAR365G0341 Trochodendron aralioides HOM05D004013 ORTHO05D004710 6.4e-149 531.6 495 56.6
arahy.Tifrunner.gnm1.ann1.LVD0DC Arachis hypogaea HOM05D004013 ORTHO05D004710 1.1e-148 530.8 492 55.3
Manes.01G009000 Manihot esculenta HOM05D004013 ORTHO05D004710 5.4e-148 528.5 398 64.1
COL.COLO4_06916 Corchorus olitorius HOM05D004013 ORTHO05D004710 1.6e-147 526.9 499 56.7
Glyma.18G248400 Glycine max HOM05D004013 ORTHO05D004710 6.0e-147 525.0 498 55.0
CiPaw.09G068100 Carya illinoinensis HOM05D004013 ORTHO05D004710 1.0e-146 524.2 399 64.2
TWI63G0479 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 1.0e-146 524.2 491 55.0
arahy.Tifrunner.gnm1.ann1.ERJ0Z2 Arachis hypogaea HOM05D004013 ORTHO05D004710 1.5e-145 520.4 503 53.9
arahy.Tifrunner.gnm1.ann1.M4STP7 Arachis hypogaea HOM05D004013 ORTHO05D004710 1.5e-145 520.4 488 54.7
MELO3C008520.2 Cucumis melo HOM05D004013 ORTHO05D004710 1.5e-145 520.4 479 54.9
TAR633G1686 Trochodendron aralioides HOM05D004013 ORTHO05D004710 1.5e-145 520.4 493 56.2
Hma1.2p1_0940F.1_g239620 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 1.9e-145 520.0 492 55.7
Psat0s3112g0040 Pisum sativum HOM05D004013 ORTHO05D004710 2.5e-145 519.6 490 54.1
vmacro09116 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 3.3e-145 519.2 479 56.4
CSS0003826 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 4.3e-145 518.8 497 55.7
CSS0048139 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 1.2e-144 517.3 497 55.5
TWI15G0551 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 1.2e-144 517.3 446 57.0
THA.LOC104808419 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 1.6e-144 516.9 314 78.7
Sed0016347 Sechium edule HOM05D004013 ORTHO05D004710 3.6e-144 515.8 478 54.4
Lalb_Chr01g0021691 Lupinus albus HOM05D004013 ORTHO05D004710 6.2e-144 515.0 463 56.6
HanXRQChr08g0212421 Helianthus annuus HOM05D004013 ORTHO05D004710 2.3e-143 513.1 396 63.4
CsaV3_2G011360 Cucumis sativus L. HOM05D004013 ORTHO05D004710 3.1e-143 512.7 478 54.0
ECA232G0201 Erigeron canadensis HOM05D004013 ORTHO05D004710 5.2e-143 511.9 482 56.8
CANSAT78G0639 Cannabis sativa HOM05D004013 ORTHO05D004710 8.9e-143 511.1 424 58.3
PSO732G0206 Papaver somniferum HOM05D004013 ORTHO05D004710 1.2e-142 510.8 462 57.8
PSO675G0050 Papaver somniferum HOM05D004013 ORTHO05D004710 2.0e-142 510.0 458 57.6
HanXRQChr12g0363401 Helianthus annuus HOM05D004013 ORTHO05D004710 3.4e-142 509.2 387 63.3
Lj3C865T7 Lonicera japonica HOM05D004013 ORTHO05D004710 7.6e-142 508.1 490 55.3
Nn1g09391 Nelumbo nucifera HOM05D004013 ORTHO05D004710 2.9e-141 506.1 443 58.7
Lalb_Chr03g0040611 Lupinus albus HOM05D004013 ORTHO05D004710 7.8e-139 498.0 457 55.4
ECA233G0032 Erigeron canadensis HOM05D004013 ORTHO05D004710 2.3e-138 496.5 475 55.4
Lsat_1_v5_gn_8_45601 Lactuca sativa HOM05D004013 ORTHO05D004710 3.0e-138 496.1 486 54.1
Rhsim09G0091900 Rhododendron simsii HOM05D004013 ORTHO05D004710 1.5e-137 493.8 543 51.0
Nitab4.5_0001568g0070 Nicotiana tabacum HOM05D004013 ORTHO05D004710 2.5e-137 493.0 406 59.1
Nitab4.5_0005132g0050 Nicotiana tabacum HOM05D004013 ORTHO05D004710 3.3e-137 492.7 406 59.4
DCAR_023584 Daucus carota HOM05D004013 ORTHO05D004710 9.6e-137 491.1 473 54.1
Hund22667 Selenicereus undatus HOM05D004013 ORTHO05D004710 9.6e-137 491.1 403 59.6
MBI15_g08971_MAGBIO Magnolia biondii HOM05D004013 ORTHO05D004710 1.6e-136 490.3 415 60.0
PGR142G2472 Punica granatum HOM05D004013 ORTHO05D004710 8.1e-136 488.0 415 58.3
CAN.G140.48 Capsicum annuum HOM05D004013 ORTHO05D004710 1.4e-135 487.3 443 56.2
PGSC0003DMG400032144 Solanum tuberosum HOM05D004013 ORTHO05D004710 2.4e-135 486.5 444 55.9
Oeu011024.1 Olea europaea HOM05D004013 ORTHO05D004710 3.1e-135 486.1 393 58.0
SalBow7G0073 Salvia bowleyana HOM05D004013 ORTHO05D004710 5.2e-135 485.3 508 52.2
ATR0706G248 Amborella trichopoda HOM05D004013 ORTHO05D004710 6.8e-135 485.0 497 51.7
arahy.Tifrunner.gnm1.ann1.AL59ZJ Arachis hypogaea HOM05D004013 ORTHO05D004710 1.2e-134 484.2 488 52.0
AUR62023683 Chenopodium quinoa HOM05D004013 ORTHO05D004710 1.5e-134 483.8 398 59.8
MSTRG.23493 Avicennia marina HOM05D004013 ORTHO05D004710 2.0e-134 483.4 505 52.3
Ah.07g203370 Amaranthus hybridus HOM05D004013 ORTHO05D004710 2.6e-134 483.0 496 53.2
Migut.L00578 Erythranthe guttata HOM05D004013 ORTHO05D004710 3.4e-134 482.6 389 59.9
Lj6A740G51 Lonicera japonica HOM05D004013 ORTHO05D004710 1.3e-133 480.7 493 51.9
Migut.L00278 Erythranthe guttata HOM05D004013 ORTHO05D004710 2.2e-133 479.9 476 52.7
Sopen01g002230 Solanum pennellii HOM05D004013 ORTHO05D004710 1.1e-132 477.6 444 55.2
CDE06G1594 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 1.4e-132 477.2 411 56.9
CDE04G0030 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 2.4e-132 476.5 428 56.1
Solyc01g006230.3 Solanum lycopersicum HOM05D004013 ORTHO05D004710 2.4e-132 476.5 444 55.0
SGA_v2.0_scaffold37G14795 Striga asiatica HOM05D004013 ORTHO05D004710 1.2e-131 474.2 396 58.8
EL10Ac3g06192 Beta vulgaris HOM05D004013 ORTHO05D004710 6.0e-131 471.9 515 51.3
FAN24G3388 Fragaria x ananassa HOM05D004013 ORTHO05D004710 2.3e-130 469.9 418 56.7
AUR62002510 Chenopodium quinoa HOM05D004013 ORTHO05D004710 3.9e-130 469.2 496 50.8
FvH4_2g06800 Fragaria vesca HOM05D004013 ORTHO05D004710 6.6e-130 468.4 419 56.8
FAN20G2928 Fragaria x ananassa HOM05D004013 ORTHO05D004710 1.5e-129 467.2 419 57.5
SHI01175 Sapria himalayana HOM05D004013 ORTHO05D004710 2.5e-129 466.5 490 53.1
Ah.13g073110 Amaranthus hybridus HOM05D004013 ORTHO05D004710 3.3e-129 466.1 391 58.3
SGA_v2.0_scaffold3G01797 Striga asiatica HOM05D004013 ORTHO05D004710 1.6e-128 463.8 433 54.5
Os04g0682000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 6.2e-128 461.8 486 50.0
Haze_06261 Corylus avellana HOM05D004013 ORTHO05D004710 8.1e-128 461.5 743 39.2
FAN15G0687 Fragaria x ananassa HOM05D004013 ORTHO05D004710 8.1e-128 461.5 374 60.7
FAN27G1923 Fragaria x ananassa HOM05D004013 ORTHO05D004710 8.1e-128 461.5 419 56.8
RcHm_v2.0_Chr6g0259021 Rosa chinensis HOM05D004013 ORTHO05D004710 9.0e-127 458.0 415 57.6
unitig_748.g8760 Utricularia gibba HOM05D004013 ORTHO05D004710 2.0e-126 456.8 405 55.3
DCAR_026793 Daucus carota HOM05D004013 ORTHO05D004710 2.9e-125 453.0 405 56.5
Zm00001eb065800 Zea mays HOM05D004013 ORTHO05D004710 8.4e-125 451.4 476 49.8
CSS0004368 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 1.4e-124 450.7 429 55.0
SEGI_37986 Sequoiadendron giganteum HOM05D004013 ORTHO05D004710 7.1e-124 448.4 452 52.2
vmacro10687 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 1.3e-122 444.1 546 47.4
Os03g0391000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 2.3e-122 443.4 480 49.4
Pp3c11_22820 Physcomitrium patens HOM05D004013 ORTHO05D004710 1.3e-120 437.6 395 54.2
HPP92_020809 Vanilla planifolia HOM05D004013 ORTHO05D004710 3.6e-120 436.0 499 47.9
Zm00001eb433950 Zea mays HOM05D004013 ORTHO05D004710 3.6e-120 436.0 379 55.9
Peaxi162Scf00441g00621 Petunia axillaris HOM05D004013 ORTHO05D004710 4.6e-115 419.1 394 54.3
Oeu034368.2 Olea europaea HOM05D004013 ORTHO05D004710 7.4e-113 411.8 606 39.9
Dinv18636 Davidia involucrata HOM05D004013 ORTHO05D004710 1.3e-112 411.0 317 62.5
Pp3c7_280 Physcomitrium patens HOM05D004013 ORTHO05D004710 1.3e-112 411.0 396 50.0
Mapoly0153s0038 Marchantia polymorpha HOM05D004013 ORTHO05D004710 2.8e-112 409.8 415 49.4
Sed0011939 Sechium edule HOM05D004013 ORTHO05D004710 4.8e-112 409.1 367 56.4
ClCG06G010000 Citrullus lanatus HOM05D004013 ORTHO05D004710 1.5e-110 404.1 363 55.6
Sc08g0007990 Simmondsia chinensis HOM05D004013 ORTHO05D004710 2.7e-107 393.3 377 54.9
SMO145G0104 Selaginella moellendorffii HOM05D004013 ORTHO05D004710 6.9e-103 378.6 377 52.0
C08p34940 Brassica napus HOM05D004013 ORTHO05D004710 2.1e-99 367.1 208 86.5
Oeu053147.1 Olea europaea HOM05D004013 ORTHO05D004710 4.4e-81 306.2 278 52.5
Actinidia29462 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.8e-74 284.3 218 61.9
Zm00001eb419970 Zea mays HOM05D004013 ORTHO05D004710 2.8e-72 276.9 248 55.6
CBR_g21952 Chara braunii HOM05D004013 ORTHO05D004710 8.5e-61 238.8 311 43.1
Sabra17G0005400 Salix brachista HOM05D004013 ORTHO05D004710 5.5e-60 236.1 273 50.9
Actinidia29461 Actinidia chinensis HOM05D004013 ORTHO05D004710 8.0e-59 232.3 227 57.3
C08p34950 Brassica napus HOM05D004013 ORTHO05D004710 1.0e-58 231.9 215 61.4
Hma1.2p1_1910F.1_g307280 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 4.4e-57 226.5 279 45.5
Zm00001eb264230 Zea mays HOM05D004013 ORTHO05D004710 7.5e-57 225.7 238 48.7
PRCOL_00001711 Prasinoderma coloniale HOM05D004013 ORTHO05D004710 2.6e-49 200.7 460 33.5
Oeu037862.1 Olea europaea HOM05D004013 ORTHO05D004710 2.7e-46 190.7 295 36.9
Actinidia36638 Actinidia chinensis HOM05D004013 ORTHO05D004710 5.6e-44 183.0 413 34.4
THA.LOC104804900 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 4.9e-40 169.9 197 52.8
unitig_32.g11897 Utricularia gibba HOM05D004013 ORTHO05D004710 8.6e-37 159.1 261 39.5
MCO13G568 Micromonas commoda HOM05D004013 ORTHO05D004710 1.4e-31 141.7 289 32.9
Peaxi162Scf00271g00518 Petunia axillaris HOM05D004013 ORTHO05D004710 1.3e-24 118.6 117 53.0
Cre12.g510100 Chlamydomonas reinhardtii HOM05D004013 ORTHO05D004710 1.9e-23 114.8 630 21.9
ClCG06G009970 Citrullus lanatus HOM05D004013 ORTHO05D004710 7.1e-23 112.8 81 58.0
Actinidia03474 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.7e-21 108.2 105 52.4
arahy.Tifrunner.gnm1.ann1.MVA4LE Arachis hypogaea HOM05D004013 ORTHO05D004710 1.1e-20 105.5 121 47.1
arahy.Tifrunner.gnm1.ann1.AC7664 Arachis hypogaea HOM05D004013 ORTHO05D004710 2.7e-14 84.3 97 45.4
Cfa022146 Carpinus fangiana HOM05D004013 ORTHO05D124891 2.7e-14 84.3 335 27.8
ATR0807G232 Amborella trichopoda HOM05D004013 ORTHO05D004710 6.2e-11 73.2 84 47.6
Actinidia03477 Actinidia chinensis HOM05D004013 ORTHO05D004710 3.1e-10 70.9 116 44.8
ATR0807G053 Amborella trichopoda HOM05D004013 ORTHO05D004710 3.4e-09 67.4 47 66.0


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