Gene: AT3G59280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59280
  • Transcript Identifier AT3G59280.2
  • Gene Type Coding gene
  • Location Chr3 : 21908795-21910519 : negative

Gene Family Information

  • ID HOM05D002266
  • #Genes/#Species 297/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59280.2
  • symbol TXR1
  • Alias AtPAM16,MUSE5,mutant, snc1-enhancing 5,PAM16
  • full_name THAXTOMIN A RESISTANT 1
  • uniprot Q93VV9

Descriptions

  • Description Protein Transporter, Pam16
  • Computational description THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000378
IMP
Gene Ontologynegative regulation of reactive oxygen species metabolic process1
GO:0030150
IBA
IEA
Gene Ontologyprotein import into mitochondrial matrix2
GO:0030150
IEA
InterProprotein import into mitochondrial matrix
GO:0015031
IEA
GOA Databaseprotein transport
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0006952
IEA
GOA Databasedefense response
GO:1902289
IMP
Gene Ontologynegative regulation of defense response to oomycetes1
GO:1900425
IMP
Gene Ontologynegative regulation of defense response to bacterium1
GO:0031348
IMP
Gene Ontologynegative regulation of defense response1
GO:2000012
IMP
Gene Ontologyregulation of auxin polar transport3
GO:1902009
IMP
Gene Ontologypositive regulation of toxin transport4
GO:0002237
IMP
Gene Ontologyresponse to molecule of bacterial origin4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005744
IBA
IEA
Gene OntologyTIM23 mitochondrial import inner membrane translocase complex2
GO:0005744
IEA
InterProTIM23 mitochondrial import inner membrane translocase complex
GO:0016020
IEA
GOA Databasemembrane
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
ISM
Gene Ontologymitochondrion5
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm4
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0005743
IDA
Gene Ontologymitochondrial inner membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005341 Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 Chaperone J-domain superfamily
Mapman id Description
23.2.3.1 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.component Pam16