Gene: AT3G58900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G58900
  • Transcript Identifier AT3G58900.1
  • Gene Type Coding gene
  • Location Chr3 : 21773030-21774013 : positive

Gene Family Information

  • ID HOM05D000689
  • #Genes/#Species 831/16
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G58900.1
  • uniprot Q93ZX6

Descriptions

  • Description F-box/RNI-like superfamily protein
  • Computational description F-box/RNI-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G58860.1); Has 1949 Blast hits to 1913 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 1937; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0000209
ISO
PLAZA Tree-based Orthologyprotein polyubiquitination AT3G42770
GO:0006952
ISO
PLAZA Tree-based Orthologydefense response AT3G03040
GO:0016036
ISO
PLAZA Tree-based Orthologycellular response to phosphate starvation AT3G42770
GO:0009901
ISO
PLAZA Tree-based Orthologyanther dehiscence AT3G62440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Tree-based Orthologyubiquitin protein ligase activity AT3G42770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Tree-based Orthologynucleus AT4G27050
GO:0005737
ISO
PLAZA Tree-based Orthologycytoplasm AT4G27050
GO:0005783
ISO
PLAZA Tree-based Orthologyendoplasmic reticulum AT1G47920
GO:0005773
ISO
PLAZA Tree-based Orthologyvacuole AT5G25860
GO:0031225
ISO
PLAZA Tree-based Orthologyanchored component of membrane AT3G58890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
IPR013101 Leucine-rich repeat 2
Mapman id Description
35.1 not assigned.annotated