Gene: AT3G58840
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G58840
- Transcript Identifier AT3G58840.2
- Gene Type Coding gene
- Location Chr3 : 21757499-21758455 : negative
Gene Family Information
- ID HOM05D006785
- #Genes/#Species 119/62
- Phylogenetic origin
- ID ORTHO05D006259
- #Genes/#Species 145/78
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G58840.2
- symbol PMD1
- full_name peroxisomal and mitochondrial division factor 1
- uniprot Q9LXR8
Descriptions
- Description Tropomyosin-like protein
- Computational description Tropomyosin-related; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Tropomyosin-related (TAIR:AT1G06530.1); Has 153429 Blast hits to 70272 proteins in 3237 species: Archae - 2904; Bacteria - 24810; Metazoa - 70427; Fungi - 12541; Plants - 7497; Viruses - 710; Other Eukaryotes - 34540 (source: NCBI BLink).
- Computational description Tropomyosin-related; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Tropomyosin-related (TAIR:AT1G06530.1); Has 153329 Blast hits to 70216 proteins in 3225 species: Archae - 2898; Bacteria - 24754; Metazoa - 70421; Fungi - 12510; Plants - 7496; Viruses - 710; Other Eukaryotes - 34540 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007031 | IEA | GOA Database | peroxisome organization | |
| GO:0007031 | IMP | Gene Ontology | peroxisome organization | 1 |
| GO:0007005 | IMP | Gene Ontology | mitochondrion organization | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042803 | IPI | Gene Ontology | protein homodimerization activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA, HDA | Gene Ontology | mitochondrion | 1 2 |
| GO:0005777 | IEA | GOA Database | peroxisome | |
| GO:0005777 | IDA | Gene Ontology | peroxisome | 1 |
| GO:0009536 | IDA | GOA Database | plastid | |
| GO:0005741 | IEA | GOA Database | mitochondrial outer membrane | |
| GO:0005778 | IEA | GOA Database | peroxisomal membrane | |
| GO:0005778 | IDA | Gene Ontology | peroxisomal membrane | 1 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0031966 | IDA | Gene Ontology | mitochondrial membrane | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 13.6.2.3 | Cell cycle organisation.organelle division.mitochondrion and peroxisome division.division factor (PMD) |