Gene: AT3G58390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G58390
  • Transcript Identifier AT3G58390.1
  • Gene Type Coding gene
  • Location Chr3 : 21600030-21601217 : negative

Gene Family Information

  • ID HOM05D003116
  • #Genes/#Species 220/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G58390.1
  • uniprot Q9M2H7

Descriptions

  • Description Eukaryotic release factor 1 (eRF1) family protein
  • Computational description Eukaryotic release factor 1 (eRF1) family protein; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination, translation; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT4G27650.1); Has 768 Blast hits to 765 proteins in 318 species: Archae - 259; Bacteria - 0; Metazoa - 140; Fungi - 157; Plants - 51; Viruses - 1; Other Eukaryotes - 160 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071025
IEA
Gene OntologyRNA surveillance
GO:0071025
IEA
InterProRNA surveillance
GO:0070966
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, no-go decay
GO:0070966
IEP
IBA
Gene Ontologynuclear-transcribed mRNA catabolic process, no-go decay1 2
GO:0070966
IEA
InterPronuclear-transcribed mRNA catabolic process, no-go decay
GO:0070481
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, non-stop decay
GO:0070481
IEP
Gene Ontologynuclear-transcribed mRNA catabolic process, non-stop decay2
GO:0070481
IEA
InterPronuclear-transcribed mRNA catabolic process, non-stop decay
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0032790
IBA
Gene Ontologyribosome disassembly1
GO:0070651
IBA
Gene Ontologynonfunctional rRNA decay1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038069 Pelota/DOM34, N-terminal domain
IPR004405 Translation release factor pelota
IPR005140 eRF1 domain 1/Pelota-like
IPR029064 50S ribosomal protein L30e-like
IPR005141 eRF1 domain 2
IPR042226 eRF1, domain 2 superfamily
IPR005142 eRF1 domain 3
Mapman id Description
17.3.3.1.1 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.component DOM34/LML1