Gene: AT3G56990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G56990
  • Transcript Identifier AT3G56990.2
  • Gene Type Coding gene
  • Location Chr3 : 21089037-21091976 : negative

Gene Family Information

  • ID HOM05D003729
  • #Genes/#Species 184/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G56990.2
  • symbol EDA7
  • uniprot Q9M1J9

Descriptions

  • Description embryo sac development arrest 7
  • Computational description embryo sac development arrest 7 (EDA7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), NUC153 (InterPro:IPR012580), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009561
IMP
Gene Ontologymegagametogenesis1
GO:0000462
IBA
Gene Ontologymaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IDA
IEA
GOA Databasenucleolus
GO:0005730
HDA
IBA
Gene Ontologynucleolus2 3
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex4
GO:0032040
IBA
Gene Ontologysmall-subunit processome2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040382 Nucleolar protein 10/Enp2
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated