Gene: AT3G56640
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G56640
- Transcript Identifier AT3G56640.1
- Gene Type Coding gene
- Location Chr3 : 20981964-20984336 : positive
Gene Family Information
- ID HOM05D000657
- #Genes/#Species 864/99
- Phylogenetic origin
- ID ORTHO05D002092
- #Genes/#Species 318/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G56640.1
- symbol SEC15A
- uniprot Q9LXX6
Descriptions
- Description exocyst complex component sec15A
- Computational description exocyst complex component sec15A (SEC15A); CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15B (TAIR:AT4G02350.1); Has 442 Blast hits to 436 proteins in 182 species: Archae - 3; Bacteria - 0; Metazoa - 174; Fungi - 134; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090522 | IEA | Gene Ontology | vesicle tethering involved in exocytosis | |
| GO:0090522 | IEA | InterPro | vesicle tethering involved in exocytosis | |
| GO:0006886 | IEA | Gene Ontology | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006887 | IEA | GOA Database | exocytosis | |
| GO:0006887 | IBA | Gene Ontology | exocytosis | 1 |
| GO:0006893 | IBA | Gene Ontology | Golgi to plasma membrane transport | 1 |
| GO:0060321 | IGI | Gene Ontology | acceptance of pollen | 2 |
| GO:0009860 | IMP | Gene Ontology | pollen tube growth | 3 |
| GO:0009846 | IMP | Gene Ontology | pollen germination | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000145 | IDA IBA | Gene Ontology | exocyst | 1 3 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0005829 | IDA | Gene Ontology | cytosol | 4 |
| GO:0016020 | IBA | Gene Ontology | membrane | 1 |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.5.1.7 | Vesicle trafficking.exocytic trafficking.Exocyst complex.component SEC15 |