Gene: AT3G56310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G56310
  • Transcript Identifier AT3G56310.1
  • Gene Type Coding gene
  • Location Chr3 : 20882886-20885745 : positive

Gene Family Information

  • ID HOM05D001168
  • #Genes/#Species 530/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G56310.1
  • uniprot Q8VXZ7

Descriptions

  • Description Melibiase family protein
  • Computational description Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1574 Blast hits to 1565 proteins in 338 species: Archae - 4; Bacteria - 582; Metazoa - 329; Fungi - 273; Plants - 224; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IDA
Gene Ontologycarbohydrate metabolic process1
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004557
IEA
GOA Databasealpha-galactosidase activity
GO:0004557
IDA
Gene Ontologyalpha-galactosidase activity1
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0052692
IEA
Gene Ontologyraffinose alpha-galactosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005773
IDA
IEA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole2
GO:0005618
IEA
GOA Databasecell wall
GO:0048046
IEA
GOA Databaseapoplast
GO:0009505
IBA
Gene Ontologyplant-type cell wall3
GO:0099503
HDA
Gene Ontologysecretory vesicle4
GO:0000325
HDA
Gene Ontologyplant-type vacuole5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR002241 Glycoside hydrolase, family 27
IPR041233 Alpha galactosidase, C-terminal beta sandwich domain
IPR013780 Glycosyl hydrolase, all-beta
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase