Gene: AT3G55470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55470
  • Transcript Identifier AT3G55470.2
  • Gene Type Coding gene
  • Location Chr3 : 20564356-20566092 : positive

Gene Family Information

  • ID HOM05D001158
  • #Genes/#Species 533/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55470.2
  • uniprot Q9M2T2

Descriptions

  • Description Calcium-dependent lipid-binding (CaLB domain) family protein
  • Computational description Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 2395 Blast hits to 2293 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 1201; Fungi - 119; Plants - 879; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).
  • Computational description Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 2758 Blast hits to 2659 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 1386; Fungi - 195; Plants - 959; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
Gene OntologyRNA binding1
GO:0046872
IEA
GOA Databasemetal ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035892 C2 domain superfamily
IPR000008 C2 domain
Mapman id Description
35.1 not assigned.annotated