Gene: AT3G55440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55440
  • Transcript Identifier AT3G55440.1
  • Gene Type Coding gene
  • Location Chr3 : 20553794-20556078 : positive

Gene Family Information

  • ID HOM05D001403
  • #Genes/#Species 446/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55440.1
  • symbol TPI
  • Alias ATCTIMC,CYTOSOLIC TRIOSE PHOSPHATE ISOMERASE,CYTOTPI,CYTOSOLIC ISOFORM TRIOSE PHOSPHATE ISOMERASE
  • uniprot P48491

Descriptions

  • Description triosephosphate isomerase
  • Computational description triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019563
IBA
Gene Ontologyglycerol catabolic process1
GO:0006096
IBA
IC, IEA
Gene Ontologyglycolytic process1 2
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0046166
IBA
Gene Ontologyglyceraldehyde-3-phosphate biosynthetic process1
GO:0006094
IBA
IEA
Gene Ontologygluconeogenesis1
GO:0044262
IDA
Gene Ontologycellular carbohydrate metabolic process2
GO:0010043
IEP
Gene Ontologyresponse to zinc ion3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004807
IEA
GOA Databasetriose-phosphate isomerase activity
GO:0004807
IDA
IBA
Gene Ontologytriose-phosphate isomerase activity1 2
GO:0004807
IEA
InterProtriose-phosphate isomerase activity
GO:0005507
IDA
GOA Databasecopper ion binding
GO:0005507
HDA
Gene Ontologycopper ion binding4
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
IBA
Gene Ontologycytosol1 6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
Gene Ontologymitochondrion7 8
GO:0005618
IDA
GOA Databasecell wall
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane9
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast10
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast11
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma12
GO:0000325
HDA
Gene Ontologyplant-type vacuole13
GO:0009505
HDA
Gene Ontologyplant-type cell wall14
GO:0005794
RCA
Gene OntologyGolgi apparatus15

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000652 Triosephosphate isomerase
IPR035990 Triosephosphate isomerase superfamily
IPR013785 Aldolase-type TIM barrel
Mapman id Description
2.1.1.3 Cellular respiration.glycolysis.cytosolic glycolysis.triose-phosphate isomerase
3.1.2.1 Carbohydrate metabolism.sucrose metabolism.biosynthesis.cytosolic triose-phosphate isomerase