Gene: AT3G55400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55400
  • Transcript Identifier AT3G55400.1
  • Gene Type Coding gene
  • Location Chr3 : 20535809-20538999 : negative

Gene Family Information

  • ID HOM05D005343
  • #Genes/#Species 142/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55400.1
  • symbol OVA1
  • full_name OVULE ABORTION 1
  • uniprot Q9M2T9

Descriptions

  • Description methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS)
  • Computational description OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 26528 Blast hits to 25030 proteins in 3018 species: Archae - 991; Bacteria - 17017; Metazoa - 429; Fungi - 593; Plants - 193; Viruses - 3; Other Eukaryotes - 7302 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006431
IBA
IEA
Gene Ontologymethionyl-tRNA aminoacylation1
GO:0006431
IEA
InterPromethionyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0048481
IMP
Gene Ontologyplant ovule development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004825
IDA
IBA
IEA
Gene Ontologymethionine-tRNA ligase activity1 3
GO:0004825
IEA
InterPromethionine-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
IBA
Gene Ontologymitochondrion1 4 5
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma1 6
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast5 7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain
IPR033911 Methioninyl-tRNA synthetase core domain
IPR015413 Methionyl/Leucyl tRNA synthetase
IPR014758 Methionyl-tRNA synthetase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR002300 Aminoacyl-tRNA synthetase, class Ia
Mapman id Description
17.2.14 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase