Gene: AT3G55090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55090
  • Transcript Identifier AT3G55090.1
  • Gene Type Coding gene
  • Location Chr3 : 20416342-20418552 : negative

Gene Family Information

  • ID HOM05D000419
  • #Genes/#Species 1217/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55090.1
  • symbol ABCG16
  • Alias AtABCG16
  • full_name ATP-binding cassette G16
  • uniprot Q9M2V7

Descriptions

  • Description ABC-2 type transporter family protein
  • Computational description ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G39350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010208
IGI
Gene Ontologypollen wall assembly1
GO:0055085
IEA
GOA Databasetransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042626
ISS
Gene OntologyATPase-coupled transmembrane transporter activity
GO:0140359
IEA
Gene OntologyABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043926 ABC transporter family G domain
IPR013525 ABC-2 type transporter
IPR003593 AAA+ ATPase domain
IPR003439 ABC transporter-like, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
24.1.3.2.2 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter