Gene: AT3G54790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54790
  • Transcript Identifier AT3G54790.1
  • Gene Type Coding gene
  • Location Chr3 : 20281830-20284363 : negative

Gene Family Information

  • ID HOM05D001760
  • #Genes/#Species 369/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54790.1
  • uniprot Q8GWV5

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.1); Has 7024 Blast hits to 4442 proteins in 284 species: Archae - 0; Bacteria - 30; Metazoa - 1370; Fungi - 570; Plants - 4306; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011989 Armadillo-like helical
IPR000225 Armadillo
IPR003613 U box domain
IPR016024 Armadillo-type fold
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase