Gene: AT3G54710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54710
  • Transcript Identifier AT3G54710.1
  • Gene Type Coding gene
  • Location Chr3 : 20251885-20254031 : positive

Gene Family Information

  • ID HOM05D002084
  • #Genes/#Species 319/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54710.1
  • symbol CDT1B
  • Alias ATCDT1B,ARABIDOPSIS HOMOLOG OF YEAST CDT1 B,CDT1,ARABIDOPSIS HOMOLOG OF YEAST CDT1
  • full_name homolog of yeast CDT1 B homolog of yeast CDT1 B
  • uniprot Q9M1S9

Descriptions

  • Description CDT1-like protein B
  • Computational description homolog of yeast CDT1 B homolog of yeast CDT1 B (CDT1B); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 A (TAIR:AT2G31270.1); Has 203 Blast hits to 178 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 4; Plants - 70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007049
IEA
GOA Databasecell cycle
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IMP
Gene OntologyDNA replication1
GO:0030174
IBA
Gene Ontologyregulation of DNA-dependent DNA replication initiation2
GO:0000076
IBA
Gene OntologyDNA replication checkpoint signaling2
GO:0071163
IBA
Gene OntologyDNA replication preinitiation complex assembly2
GO:0000278
IBA
Gene Ontologymitotic cell cycle2
GO:0051276
IMP
Gene Ontologychromosome organization3
GO:0048229
IMP
Gene Ontologygametophyte development3
GO:0009658
IMP
Gene Ontologychloroplast organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070182
IPI
IBA
Gene OntologyDNA polymerase binding2 3
GO:0003677
IBA
Gene OntologyDNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0004693
ISS
Gene Ontologycyclin-dependent protein serine/threonine kinase activity5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014939 CDT1 Geminin-binding domain-like
IPR032054 DNA replication factor Cdt1, C-terminal
IPR038090 DNA replication factor Cdt1, C-terminal WH domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
13.2.1.3 Cell cycle organisation.DNA replication.preinitiation.helicase auxiliary factor (CDT1)