Gene: AT3G54480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54480
  • Transcript Identifier AT3G54480.5
  • Gene Type Coding gene
  • Location Chr3 : 20170883-20173325 : negative

Gene Family Information

  • ID HOM05D005955
  • #Genes/#Species 132/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54480.5
  • symbol SKIP5
  • Alias SKP5
  • uniprot Q94FT2

Descriptions

  • Description SKP1/ASK-interacting protein 5
  • Computational description SKP1/ASK-interacting protein 5 (SKIP5); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 46 Blast hits to 46 proteins in 18 species: Archae - 2; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045140 SHC SH2 domain-binding protein 1-like
IPR001810 F-box domain
IPR011050 Pectin lyase fold/virulence factor
IPR036047 F-box-like domain superfamily
Mapman id Description
19.2.2.8.1.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX)