Gene: AT3G54130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54130
  • Transcript Identifier AT3G54130.1
  • Gene Type Coding gene
  • Location Chr3 : 20042895-20044429 : negative

Gene Family Information

  • ID HOM05D005750
  • #Genes/#Species 135/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54130.1
  • uniprot Q9M391

Descriptions

  • Description Josephin family protein
  • Computational description Josephin family protein; CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 590 Blast hits to 584 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 14; Plants - 76; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IBA
Gene Ontologyprotein deubiquitination1
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0004843
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033865 Machado-Joseph disease protein
IPR006155 Josephin domain
Mapman id Description
35.1 not assigned.annotated