Gene: AT3G53680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53680
  • Transcript Identifier AT3G53680.1
  • Gene Type Coding gene
  • Location Chr3 : 19892863-19897412 : negative

Gene Family Information

  • ID HOM05D001217
  • #Genes/#Species 514/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53680.1
  • uniprot C0SVE6

Descriptions

  • Description Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
  • Computational description Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IBA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding1
GO:0003682
IBA
Gene Ontologychromatin binding1
GO:0042393
IBA
Gene Ontologyhistone binding1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032308 Jas TPL-binding domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR016181 Acyl-CoA N-acyltransferase
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
35.1 not assigned.annotated