Gene: AT3G52930
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G52930
- Transcript Identifier AT3G52930.1
- Gene Type Coding gene
- Location Chr3 : 19627383-19628874 : negative
Gene Family Information
- ID HOM05D000722
- #Genes/#Species 801/100
- Phylogenetic origin
- ID ORTHO05D000590
- #Genes/#Species 757/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G52930.1
- symbol FBA8
- Alias AtFBA8
- full_name fructose-bisphosphate aldolase 8
- uniprot Q9LF98
Descriptions
- Description Aldolase superfamily protein
- Computational description Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to cadmium ion, response to karrikin, response to salt stress, pentose-phosphate shunt; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT2G36460.1); Has 5003 Blast hits to 4997 proteins in 974 species: Archae - 0; Bacteria - 709; Metazoa - 1414; Fungi - 8; Plants - 477; Viruses - 0; Other Eukaryotes - 2395 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0080167 | IEP | GOA Database | response to karrikin | |
GO:0046686 | IEP | GOA Database | response to cadmium ion | |
GO:0030388 | IBA | Gene Ontology | fructose 1,6-bisphosphate metabolic process | 1 |
GO:0006096 | ISS, IBA IEA | Gene Ontology | glycolytic process | 1 2 |
GO:0006096 | IEA | InterPro | glycolytic process | |
GO:0048364 | ISO | PLAZA Integrative Orthology | root development | Os05g0402700 |
GO:0005986 | ISO | PLAZA Integrative Orthology | sucrose biosynthetic process | Zm00001eb144240 |
GO:0034059 | ISO | PLAZA Integrative Orthology | response to anoxia | Zm00001eb144240 |
GO:0006098 | TAS | Gene Ontology | pentose-phosphate shunt | |
GO:0006094 | ISS | Gene Ontology | gluconeogenesis | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005507 | IDA | GOA Database | copper ion binding | |
GO:0005507 | HDA | Gene Ontology | copper ion binding | 3 |
GO:0004332 | IEA | GOA Database | fructose-bisphosphate aldolase activity | |
GO:0004332 | ISS, IBA | Gene Ontology | fructose-bisphosphate aldolase activity | 1 2 |
GO:0004332 | IEA | InterPro | fructose-bisphosphate aldolase activity | |
GO:0016829 | IEA | GOA Database | lyase activity | |
GO:0003824 | IEA | GOA Database | catalytic activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
GO:0003729 | IDA | Gene Ontology | mRNA binding | 5 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IEA | GOA Database | cytosol | |
GO:0005829 | IDA, HDA IBA | Gene Ontology | cytosol | 1 6 7 |
GO:0005741 | IEA | GOA Database | mitochondrial outer membrane | |
GO:0005618 | IDA | GOA Database | cell wall | |
GO:0005774 | IDA | GOA Database | vacuolar membrane | |
GO:0005730 | IDA | GOA Database | nucleolus | |
GO:0005730 | HDA | Gene Ontology | nucleolus | 8 |
GO:0005886 | IDA | GOA Database | plasma membrane | |
GO:0005886 | HDA | Gene Ontology | plasma membrane | 9 |
GO:0009507 | IDA | GOA Database | chloroplast | |
GO:0009507 | HDA | Gene Ontology | chloroplast | 10 |
GO:0048046 | IDA | GOA Database | apoplast | |
GO:0048046 | HDA | Gene Ontology | apoplast | 11 |
GO:0009506 | IDA | GOA Database | plasmodesma | |
GO:0009506 | HDA | Gene Ontology | plasmodesma | 12 |
GO:0005739 | IEA | GOA Database | mitochondrion | |
GO:0005739 | IDA | Gene Ontology | mitochondrion | 6 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | ISM | Gene Ontology | cytoplasm | |
GO:0005740 | IDA | Gene Ontology | mitochondrial envelope | 6 |
GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 13 |
GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 14 |
GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 15 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |