Gene: AT3G52905

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G52905
  • Transcript Identifier AT3G52905.1
  • Gene Type Coding gene
  • Location Chr3 : 19614142-19615471 : negative

Gene Family Information

  • ID HOM05D004737
  • #Genes/#Species 155/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G52905.1
  • uniprot Q8GYR7

Descriptions

  • Description Polynucleotidyl transferase, ribonuclease H-like superfamily protein
  • Computational description Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, response to DNA damage stimulus, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 4393 Blast hits to 4393 proteins in 1559 species: Archae - 0; Bacteria - 3177; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 1190 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000967
IBA
Gene OntologyrRNA 5'-end processing1
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006641 YqgF/RNase H-like domain
IPR005227 Putative pre-16S rRNA nuclease
IPR012337 Ribonuclease H-like superfamily
IPR037027 YqgF/RNase H-like domain superfamily
Mapman id Description
35.1 not assigned.annotated