Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 3.5e-89 331.6 171 100.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.7e-88 329.3 171 98.8
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.3e-85 318.9 171 94.7
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.3e-85 318.9 171 94.7
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.3e-85 318.9 171 94.7
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 2.3e-85 318.9 171 95.3
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 3.0e-85 318.5 171 95.9
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 1.2e-84 316.6 171 94.7
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 4.4e-84 314.7 171 93.6
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 5.7e-84 314.3 171 93.6
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 5.7e-84 314.3 171 93.6
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 7.5e-84 313.9 172 94.2
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 9.8e-84 313.5 172 94.2
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 3.1e-82 308.5 174 93.1
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 3.1e-82 308.5 174 93.1
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 1.2e-81 306.6 172 92.4
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 1.2e-81 306.6 174 92.5
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 9.2e-58 227.3 167 70.1
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 3.9e-56 221.9 177 66.1
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.4e-53 213.4 167 65.3
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 1.4e-53 213.4 171 62.6
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 2.3e-53 212.6 110 98.2
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 5.2e-53 211.5 168 63.1
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 2.0e-52 209.5 162 64.2
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 2.6e-52 209.1 170 62.9
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 5.8e-52 208.0 171 62.0
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 6.4e-51 204.5 170 61.8
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 6.4e-51 204.5 170 61.8
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 8.3e-51 204.1 171 59.6
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 1.4e-50 203.4 171 60.8
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 1.4e-50 203.4 162 63.0
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 1.4e-50 203.4 171 60.8
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.9e-50 203.0 171 60.2
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 2.4e-50 202.6 162 64.2
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 4.1e-50 201.8 170 61.2
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 9.2e-50 200.7 162 63.0
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 2.1e-49 199.5 155 65.2
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 2.1e-49 199.5 155 65.2
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 2.7e-49 199.1 162 62.3
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 4.6e-49 198.4 154 64.3
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 6.0e-49 198.0 163 63.2
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.3e-48 196.8 169 59.8
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 2.3e-48 196.1 163 60.7
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 2.3e-48 196.1 162 59.9
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 5.1e-48 194.9 163 61.3
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 5.1e-48 194.9 162 59.9
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 5.1e-48 194.9 162 59.9
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 6.6e-48 194.5 162 59.9
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.1e-47 193.7 172 58.7
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 1.9e-47 193.0 162 61.1
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 2.5e-47 192.6 169 58.6
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.5e-47 192.6 165 59.4
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.3e-47 192.2 172 59.9
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 3.3e-47 192.2 172 58.7
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 4.3e-47 191.8 171 56.7
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 5.6e-47 191.4 164 57.9
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.6e-47 191.4 172 58.7
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 7.3e-47 191.0 206 51.0
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 7.3e-47 191.0 162 58.0
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.2e-46 190.3 154 61.7
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 2.1e-46 189.5 163 58.9
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.8e-46 189.1 162 59.3
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.8e-46 189.1 162 59.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 3.6e-46 188.7 172 56.4
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 3.6e-46 188.7 167 56.9
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-45 187.2 169 60.9
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 1.8e-45 186.4 167 58.1
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 1.5e-44 183.3 148 63.5
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.5e-44 183.3 162 57.4
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 1.5e-44 183.3 162 54.9
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 2.0e-44 183.0 167 56.9
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 5.8e-44 181.4 185 51.9
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 2.9e-43 179.1 171 55.6
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 6.4e-43 177.9 171 54.4
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.4e-42 176.8 172 52.9
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.9e-42 176.4 163 54.6
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 2.4e-42 176.0 172 54.7
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 1.6e-41 173.3 168 55.4
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 2.1e-41 172.9 168 54.2
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 3.5e-41 172.2 171 55.0
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 3.5e-41 172.2 162 55.6
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 6.0e-41 171.4 163 56.4
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 6.0e-41 171.4 162 54.9
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 7.8e-41 171.0 163 58.3
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 1.7e-40 169.9 162 54.3
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 3.0e-40 169.1 162 53.7
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 3.9e-40 168.7 155 55.5
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 1.1e-39 167.2 172 53.5
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.5e-39 166.8 152 57.9
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 1.5e-39 166.8 162 53.7
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.3e-38 163.7 159 52.8
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 1.1e-37 160.6 162 53.7
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.3e-35 153.7 135 60.0
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 4.9e-35 151.8 142 58.5
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 6.4e-35 151.4 124 61.3
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.1e-34 150.6 179 46.9
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.9e-34 149.8 156 50.6
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.4e-34 149.4 162 48.1
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 9.3e-34 147.5 179 46.9
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.0e-32 144.1 169 45.6
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 3.3e-31 139.0 113 61.1
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 1.5e-28 130.2 163 46.0
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 6.4e-27 124.8 165 42.4
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 3.9e-24 115.5 179 35.2
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 7.4e-23 111.3 178 39.3
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 2.1e-22 109.8 183 39.9
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 6.2e-22 108.2 182 39.6
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 1.2e-20 104.0 151 43.0
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-20 102.8 175 38.9
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-20 102.8 135 44.4
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 2.6e-20 102.8 124 49.2
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 2.2e-19 99.8 158 41.1
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 1.1e-18 97.4 150 36.0
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-18 97.1 179 35.2
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-18 97.1 194 34.5
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.4e-18 97.1 71 64.8
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 3.2e-18 95.9 176 41.5
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 3.2e-18 95.9 165 39.4
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-18 95.5 174 38.5
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 1.2e-17 94.0 121 48.8
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 7.9e-17 91.3 164 34.8
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 1.0e-16 90.9 113 47.8
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.9e-16 89.0 76 57.9
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 6.7e-16 88.2 175 36.6
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 8.7e-16 87.8 137 35.0
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 1.5e-15 87.0 70 61.4
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 1.4e-13 80.5 71 60.6
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.4e-13 79.7 175 33.1
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-12 77.4 183 32.2
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-12 77.0 185 32.4
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-11 73.9 175 31.4
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 2.9e-11 72.8 179 28.5
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 5.5e-10 68.6 167 29.9
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-09 67.0 111 37.8
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-09 65.9 128 30.5
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 1.3e-08 63.9 45 68.9
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-08 63.5 146 30.8
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-08 62.8 166 30.7
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-08 62.8 134 30.6
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 5.1e-08 62.0 165 30.3
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 8.7e-08 61.2 161 28.0
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.9e-07 60.1 108 33.3
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 4.3e-07 58.9 116 36.2
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-06 57.4 166 27.1
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-06 57.4 124 29.8
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 3.7e-06 55.8 131 30.5


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