Gene: AT3G52470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G52470
  • Transcript Identifier AT3G52470.1
  • Gene Type Coding gene
  • Location Chr3 : 19450750-19451376 : positive

Gene Family Information

  • ID HOM05D000733
  • #Genes/#Species 798/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G52470.1
  • uniprot Q9SVC8

Descriptions

  • Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
  • Computational description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 12 (TAIR:AT2G35960.1); Has 921 Blast hits to 921 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
IEA
Gene Ontologydefense response to other organism
GO:0098542
IEA
InterProdefense response to other organism

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
IBA
Gene Ontologyplasmodesma1 2
GO:0046658
IBA
Gene Ontologyanchored component of plasma membrane2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044839 Protein NDR1-like
IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup
Mapman id Description
35.1 not assigned.annotated