Gene: AT3G49930

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49930
  • Transcript Identifier AT3G49930.1
  • Gene Type Coding gene
  • Location Chr3 : 18510246-18510893 : positive

Gene Family Information

  • ID HOM05D000174
  • #Genes/#Species 2155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49930.1
  • uniprot Q9SN24

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein
  • Computational description C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 1 (TAIR:AT5G67450.1); Has 7854 Blast hits to 5480 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 6758; Fungi - 30; Plants - 847; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006950
IBA
Gene Ontologyresponse to stress2
GO:0010200
IBA
Gene Ontologyresponse to chitin2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044653 C2H2-type zinc-finger protein AZF1/2/3-like
IPR013087 Zinc finger C2H2-type
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)