Gene: AT3G49920
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G49920
- Transcript Identifier AT3G49920.2
- Gene Type Coding gene
- Location Chr3 : 18506364-18507699 : negative
Gene Family Information
- ID HOM05D000635
- #Genes/#Species 893/100
- Phylogenetic origin
- ID ORTHO05D000488
- #Genes/#Species 869/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G49920.2
- symbol VDAC5
- Alias ATVDAC5,ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 5
- uniprot Q9M2W6
Descriptions
- Description voltage dependent anion channel 5
- Computational description voltage dependent anion channel 5 (VDAC5); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: anion transport, transmembrane transport; LOCATED IN: mitochondrial outer membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1); Has 294 Blast hits to 290 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 279; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
- Computational description voltage dependent anion channel 5 (VDAC5); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: anion transport, transmembrane transport; LOCATED IN: mitochondrial outer membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0098656 | IEA | Gene Ontology | anion transmembrane transport | |
| GO:0098656 | IEA | InterPro | anion transmembrane transport | |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:0015698 | IEA | GOA Database | inorganic anion transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008308 | IBA IEA | Gene Ontology | voltage-gated anion channel activity | 1 |
| GO:0008308 | IEA | InterPro | voltage-gated anion channel activity | |
| GO:0015288 | IEA | GOA Database | porin activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0005741 | IBA IEA | Gene Ontology | mitochondrial outer membrane | 1 |
| GO:0005741 | IEA | InterPro | mitochondrial outer membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0046930 | IEA | GOA Database | pore complex | |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |