Gene: AT3G49880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49880
  • Transcript Identifier AT3G49880.1
  • Gene Type Coding gene
  • Location Chr3 : 18496907-18498398 : positive

Gene Family Information

  • ID HOM05D003401
  • #Genes/#Species 201/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49880.1
  • uniprot Q9M2X0

Descriptions

  • Description glycosyl hydrolase family protein 43
  • Computational description glycosyl hydrolase family protein 43; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: Arabinanase/levansucrase/invertase (TAIR:AT5G67540.2); Has 1254 Blast hits to 1248 proteins in 224 species: Archae - 2; Bacteria - 1011; Metazoa - 1; Fungi - 133; Plants - 55; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010406
IMP
Gene Ontologyclassical arabinogalactan protein metabolic process1
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004565
IDA
Gene Ontologybeta-galactosidase activity1
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005794
IDA
Gene OntologyGolgi apparatus1
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006710 Glycoside hydrolase, family 43
IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily
Mapman id Description
21.2.5.2.1 Cell wall organisation.hemicellulose.arabinogalactan.modification.beta-1,3-galactosidase (GH43)