Gene: AT3G48220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G48220
- Transcript Identifier AT3G48220.1
- Gene Type Coding gene
- Location Chr3 : 17852284-17853557 : negative
Gene Family Information
- ID HOM05D002743
- #Genes/#Species 252/15
- Phylogenetic origin
- ID ORTHO05D002895
- #Genes/#Species 256/18
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G48220.1
- uniprot Q9STR6
Descriptions
- Description F-box protein
- Computational description BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G28223.1); Has 107 Blast hits to 106 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031146 | IBA | Gene Ontology | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 1 |
| GO:0016567 | IEA | GOA Database | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IBA | Gene Ontology | ubiquitin-protein transferase activity | 1 |
| GO:0005515 | ISO | PLAZA Tree-based Orthology | protein binding | AT3G26010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |