Gene: AT3G46530
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G46530
- Transcript Identifier AT3G46530.1
- Gene Type Coding gene
- Location Chr3 : 17130739-17133246 : negative
Gene Family Information
- ID HOM05D000011
- #Genes/#Species 8379/89
- Phylogenetic origin
- ID ORTHO05D000018
- #Genes/#Species 4195/85
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G46530.1
- symbol RPP13
- full_name RECOGNITION OF PERONOSPORA PARASITICA 13
- uniprot Q19FY0
Descriptions
- Description NB-ARC domain-containing disease resistance protein
- Computational description RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050832 | IMP | Gene Ontology | defense response to fungus | |
| GO:0006952 | TAS | Gene Ontology | defense response | 1 |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0098542 | IMP | Gene Ontology | defense response to other organism | 1 |
| GO:0009626 | IMP | Gene Ontology | plant-type hypersensitive response | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043531 | IEA | Gene Ontology | ADP binding | |
| GO:0043531 | IEA | InterPro | ADP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005575 | ND | Gene Ontology | cellular_component | |
| GO:0005737 | TAS | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| IPR002182 | NB-ARC |
| IPR041118 | Rx, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR038005 | Virus X resistance protein-like, coiled-coil domain |
| IPR044974 | Disease resistance protein, plants |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |