Gene: AT3G45490
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G45490
- Transcript Identifier AT3G45490.1
- Gene Type Coding gene
- Location Chr3 : 16687066-16687838 : negative
Gene Family Information
- ID HOM05D000327
- #Genes/#Species 1418/97
- Phylogenetic origin
- ID ORTHO05D014282
- #Genes/#Species 14/9
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G45490.1
- uniprot Q9M1F8
Descriptions
- Description reverse transcriptase-like protein
- Computational description BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits to 96 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | Gene Ontology | protein ubiquitination | |
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
| GO:0006278 | IEA | GOA Database | RNA-dependent DNA biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | Gene Ontology | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | Gene Ontology | RNA-DNA hybrid ribonuclease activity | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity | |
| GO:0004842 | IEA | Gene Ontology | ubiquitin-protein transferase activity | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0003964 | IEA | GOA Database | RNA-directed DNA polymerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |