Gene: AT3G45230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G45230
- Transcript Identifier AT3G45230.1
- Gene Type Coding gene
- Location Chr3 : 16569123-16569650 : positive
Gene Family Information
- ID HOM05D004188
- #Genes/#Species 169/77
- Phylogenetic origin
- ID ORTHO05D004445
- #Genes/#Species 180/77
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G45230.1
- Alias APAP1,ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN 1
- uniprot Q9M1T6
Descriptions
- Description hydroxyproline-rich glycoprotein family protein
- Computational description hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60630.1); Has 9394 Blast hits to 3408 proteins in 532 species: Archae - 18; Bacteria - 1025; Metazoa - 764; Fungi - 595; Plants - 1828; Viruses - 505; Other Eukaryotes - 4659 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009505 | IDA | Gene Ontology | plant-type cell wall | 1 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 21.4.1.1.1 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.classical arabinogalactan protein |