Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 8.8e-64 247.3 176 100.0
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 5.6e-50 201.4 182 83.0
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 2.0e-39 166.4 186 78.5
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 1.7e-38 163.3 185 62.7
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 8.3e-38 161.0 185 68.1
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 7.1e-37 157.9 185 68.6
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 1.3e-35 153.7 180 66.7
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 1.3e-35 153.7 180 66.7
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 1.3e-35 153.7 180 66.7
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 2.6e-31 139.4 180 67.8
Aa31LG4G14540 Aethionema arabicum HOM05D004188 ORTHO05D004445 2.7e-28 129.4 188 69.7
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 3.1e-24 115.9 72 84.7
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 9.6e-18 94.4 69 69.6
THA.LOC104810856 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 1.3e-17 94.0 189 59.8
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.4e-16 90.5 171 46.2
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.8e-16 90.1 171 46.2
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.6e-15 86.3 171 45.0
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 9.9e-15 84.3 177 42.9
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 2.4e-13 79.7 72 65.3
Thhalv10015987m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 5.4e-13 78.6 178 39.9
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 9.3e-13 77.8 68 60.3
BcaB01g04664 Brassica carinata HOM05D004188 ORTHO05D004445 1.2e-12 77.4 177 38.4
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.2e-12 77.4 65 63.1
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 1.2e-12 77.4 68 61.8
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 1.6e-12 77.0 73 54.8
BcaB08g36360 Brassica carinata HOM05D004188 ORTHO05D004445 2.1e-12 76.6 73 53.4
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 2.1e-12 76.6 68 57.4
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 2.7e-12 76.3 72 54.2
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 2.7e-12 76.3 68 58.8
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 2.7e-12 76.3 68 60.3
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 3.5e-12 75.9 74 54.1
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 7.9e-12 74.7 48 72.9
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 7.9e-12 74.7 73 53.4
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.0e-11 74.3 48 75.0
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.0e-11 74.3 169 37.9
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.0e-11 74.3 68 57.4
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 1.0e-11 74.3 67 61.2
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 2.3e-11 73.2 64 59.4
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.3e-11 73.2 82 54.9
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 3.0e-11 72.8 46 71.7
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 3.0e-11 72.8 46 71.7
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 3.9e-11 72.4 67 58.2
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 3.9e-11 72.4 72 54.2
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 5.1e-11 72.0 53 71.7
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 5.1e-11 72.0 69 52.2
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 5.1e-11 72.0 67 58.2
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 5.1e-11 72.0 67 58.2
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 6.7e-11 71.6 67 56.7
A03p11070 Brassica napus HOM05D004188 ORTHO05D004445 8.7e-11 71.2 73 60.3
BraA03t10421Z Brassica rapa HOM05D004188 ORTHO05D004445 8.7e-11 71.2 73 60.3
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 8.7e-11 71.2 68 55.9
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 8.7e-11 71.2 74 56.8
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 8.7e-11 71.2 74 54.1
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 1.5e-10 70.5 55 61.8
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 1.9e-10 70.1 47 74.5
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 2.5e-10 69.7 176 35.8
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 2.5e-10 69.7 69 55.1
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 2.5e-10 69.7 71 56.3
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 2.5e-10 69.7 70 52.9
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 3.3e-10 69.3 62 56.5
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 3.3e-10 69.3 70 45.7
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 4.3e-10 68.9 71 54.9
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 4.3e-10 68.9 68 58.8
Dinv32748 Davidia involucrata HOM05D004188 ORTHO05D004445 5.6e-10 68.6 65 55.4
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 5.6e-10 68.6 71 56.3
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.3e-09 67.4 56 62.5
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 1.3e-09 67.4 56 62.5
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 1.3e-09 67.4 74 54.1
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 1.3e-09 67.4 69 56.5
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 1.3e-09 67.4 68 51.5
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 1.3e-09 67.4 48 66.7
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 1.6e-09 67.0 73 56.2
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 1.6e-09 67.0 65 55.4
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 1.6e-09 67.0 64 53.1
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 1.6e-09 67.0 176 46.6
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 2.1e-09 66.6 74 54.1
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 2.1e-09 66.6 60 58.3
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 2.1e-09 66.6 72 58.3
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 2.1e-09 66.6 72 58.3
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 2.8e-09 66.2 69 55.1
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 2.8e-09 66.2 72 56.9
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 3.7e-09 65.9 46 67.4
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 3.7e-09 65.9 148 50.7
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 4.8e-09 65.5 46 69.6
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 4.8e-09 65.5 46 69.6
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 4.8e-09 65.5 171 43.3
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 6.2e-09 65.1 46 67.4
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 6.2e-09 65.1 73 52.1
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 6.2e-09 65.1 177 45.2
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 8.1e-09 64.7 176 39.8
BolC3t13742H Brassica oleracea HOM05D004188 ORTHO05D004445 1.1e-08 64.3 73 54.8
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 1.1e-08 64.3 71 56.3
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 1.4e-08 63.9 68 52.9
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 1.4e-08 63.9 69 49.3
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 1.4e-08 63.9 173 37.6
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 1.8e-08 63.5 74 59.5
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 1.8e-08 63.5 69 47.8
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 1.8e-08 63.5 68 50.0
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 3.1e-08 62.8 67 53.7
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 3.1e-08 62.8 48 60.4
TWI31G0432 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 4.0e-08 62.4 69 50.7
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 5.3e-08 62.0 67 52.2
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 5.3e-08 62.0 70 52.9
Ca_01416_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 6.9e-08 61.6 69 47.8
PSO063G5002 Papaver somniferum HOM05D011190 ORTHO05D004445 6.9e-08 61.6 68 50.0
PSO339G4510 Papaver somniferum HOM05D011190 ORTHO05D004445 6.9e-08 61.6 68 50.0
unitig_699.g19195 Utricularia gibba HOM05D004188 ORTHO05D004445 6.9e-08 61.6 40 70.0
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 9.0e-08 61.2 73 49.3
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 9.0e-08 61.2 53 60.4
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.5e-07 60.5 172 48.3
Prupe.2G214100 Prunus persica HOM05D004188 ORTHO05D004445 1.5e-07 60.5 49 55.1
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 2.0e-07 60.1 184 37.0
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 2.0e-07 60.1 64 53.1
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 2.6e-07 59.7 67 49.3
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 3.4e-07 59.3 69 43.5
Psat5g278280 Pisum sativum HOM05D004188 ORTHO05D004445 3.4e-07 59.3 65 49.2
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 3.4e-07 59.3 56 53.6
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 4.5e-07 58.9 51 60.8
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 4.5e-07 58.9 52 50.0
Ah.01g014350 Amaranthus hybridus HOM05D004188 ORTHO05D004445 4.5e-07 58.9 60 48.3
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 4.5e-07 58.9 45 60.0
C09p53350 Brassica napus HOM05D004188 ORTHO05D004445 5.8e-07 58.5 61 52.5
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 5.8e-07 58.5 159 42.8
AL8G37220 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 9.9e-07 57.8 178 47.8
TPR.G11601 Trifolium pratense HOM05D004188 ORTHO05D004445 9.9e-07 57.8 67 44.8
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.3e-06 57.4 54 51.9
Carub.0008s2131 Capsella rubella HOM05D004188 ORTHO05D004445 1.3e-06 57.4 127 37.0
MELO3C012432.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.3e-06 57.4 50 56.0
Atru.chr3.3633 Acer truncatum HOM05D004188 ORTHO05D004445 1.7e-06 57.0 179 48.0
AT5G60630 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 2.2e-06 56.6 184 31.5
Sp6g22190 Schrenkiella parvula HOM05D004188 ORTHO05D004445 3.8e-06 55.8 176 36.9
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 3.8e-06 55.8 48 56.2


User provided reference genes

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