Gene: AT3G43610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G43610
  • Transcript Identifier AT3G43610.2
  • Gene Type Coding gene
  • Location Chr3 : 15517772-15523927 : negative

Gene Family Information

  • ID HOM05D004148
  • #Genes/#Species 170/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G43610.2
  • uniprot F4IZ65

Descriptions

  • Description Spc97 / Spc98 family of spindle pole body (SBP) component
  • Computational description Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007020
IBA
IEA
Gene Ontologymicrotubule nucleation1
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0000226
IEA
GOA Databasemicrotubule cytoskeleton organization
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization
GO:0051225
IBA
Gene Ontologyspindle assembly1
GO:0051321
IBA
Gene Ontologymeiotic cell cycle1
GO:0031122
IBA
Gene Ontologycytoplasmic microtubule organization1
GO:0000278
IBA
Gene Ontologymitotic cell cycle1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051011
IBA
Gene Ontologymicrotubule minus-end binding1
GO:0043015
IBA
IEA
Gene Ontologygamma-tubulin binding1
GO:0043015
IEA
InterProgamma-tubulin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005815
IEA
Gene Ontologymicrotubule organizing center
GO:0005815
IEA
InterPromicrotubule organizing center
GO:0000922
IEA
Gene Ontologyspindle pole
GO:0000922
IEA
InterProspindle pole
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0000923
IBA
Gene Ontologyequatorial microtubule organizing center1
GO:0000930
IBA
Gene Ontologygamma-tubulin complex1
GO:0005813
IBA
Gene Ontologycentrosome1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040457 Gamma tubulin complex component, C-terminal
IPR042241 Gamma-tubulin complex, C-terminal domain superfamily
IPR041470 Gamma tubulin complex component protein, N-terminal
IPR007259 Gamma-tubulin complex component protein
Mapman id Description
20.1.2.1.6 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP6