Gene: AT3G27110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G27110
- Transcript Identifier AT3G27110.1
- Gene Type Coding gene
- Location Chr3 : 9998006-9999892 : positive
Gene Family Information
- ID HOM05D005629
- #Genes/#Species 137/93
- Phylogenetic origin
- ID ORTHO05D008000
- #Genes/#Species 124/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G27110.1
- uniprot Q9LSC4
Descriptions
- Description Peptidase family M48 family protein
- Computational description Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0071586 | IBA IEA | Gene Ontology | CAAX-box protein processing | 1 |
| GO:0071586 | IEA | InterPro | CAAX-box protein processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004222 | IDA IBA IEA | Gene Ontology | metalloendopeptidase activity | 1 2 |
| GO:0004222 | IEA | InterPro | metalloendopeptidase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0008233 | IEA | InterPro | peptidase activity | |
| GO:0008237 | IEA | GOA Database | metallopeptidase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030176 | IBA | Gene Ontology | integral component of endoplasmic reticulum membrane | 1 |
| GO:0009535 | IDA | Gene Ontology | chloroplast thylakoid membrane | 2 |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.4.5.5.1 | Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (PGM48) |