Gene: AT3G22950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22950
  • Transcript Identifier AT3G22950.2
  • Gene Type Coding gene
  • Location Chr3 : 8136364-8137513 : negative

Gene Family Information

  • ID HOM05D000049
  • #Genes/#Species 4493/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22950.2
  • symbol ARFC1
  • Alias ATARFC1,ADP-ribosylation factor C1
  • uniprot Q9LIK1

Descriptions

  • Description ADP-ribosylation factor C1
  • Computational description ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 17774 Blast hits to 17763 proteins in 550 species: Archae - 23; Bacteria - 45; Metazoa - 8202; Fungi - 2537; Plants - 2915; Viruses - 3; Other Eukaryotes - 4049 (source: NCBI BLink).
  • Computational description ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1903292
IBA
Gene Ontologyprotein localization to Golgi membrane1
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0016192
IBA
Gene Ontologyvesicle-mediated transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
ISS, IBA
Gene OntologyGTP binding1 2
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISM
Gene OntologyGolgi apparatus
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane3
GO:0005802
IBA
Gene Ontologytrans-Golgi network1
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR006689 Small GTPase superfamily, ARF/SAR type
Mapman id Description
22.3.2.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase