Gene: AT3G22590

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22590
  • Transcript Identifier AT3G22590.1
  • Gene Type Coding gene
  • Location Chr3 : 8003999-8005452 : positive

Gene Family Information

  • ID HOM05D006687
  • #Genes/#Species 120/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22590.1
  • symbol PHP
  • Alias CDC73
  • uniprot Q9LJ87

Descriptions

  • Description PLANT HOMOLOGOUS TO PARAFIBROMIN
  • Computational description PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016570
IEA
GOA Databasehistone modification
GO:0016570
IEA
InterProhistone modification
GO:0006368
IEA
Gene Ontologytranscription elongation from RNA polymerase II promoter
GO:0006368
IEA
InterProtranscription elongation from RNA polymerase II promoter
GO:0009908
IEA
GOA Databaseflower development
GO:0032968
IBA
Gene Ontologypositive regulation of transcription elongation from RNA polymerase II promoter1
GO:0034402
IBA
Gene Ontologyrecruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex1
GO:0051568
IMP
Gene Ontologyhistone H3-K4 methylation2
GO:0009911
IMP
Gene Ontologypositive regulation of flower development2
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000993
IBA
Gene OntologyRNA polymerase II complex binding1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016593
IEA
GOA DatabaseCdc73/Paf1 complex
GO:0016593
IDA
IBA
Gene OntologyCdc73/Paf1 complex1 3
GO:0016593
IEA
InterProCdc73/Paf1 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0070860
ISS
Gene OntologyRNA polymerase I core factor complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031336 Cell division control protein 73, C-terminal
IPR038103 Cell division control protein 73, C-terminal domain superfamily
IPR032041 Paf1 complex subunit Cdc73, N-terminal domain
IPR007852 Cdc73/Parafibromin
Mapman id Description
15.3.5.1.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component CDC73/PHP