Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 8.1e-233 810.1 416 100.0
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 3.0e-227 791.6 416 97.8
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 7.3e-226 786.9 416 96.4
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 5.3e-224 780.8 416 96.6
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 9.9e-223 776.5 416 95.9
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 6.4e-222 773.9 416 95.0
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.4e-221 772.7 416 94.0
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.4e-213 746.1 418 93.3
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 5.5e-213 744.2 418 92.8
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.6e-212 742.7 416 92.5
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.6e-212 742.7 416 92.5
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.6e-212 742.7 416 92.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.1e-210 736.5 416 89.7
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 5.8e-207 724.2 420 91.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.2e-175 620.2 432 75.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 7.2e-165 584.3 416 70.0
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 9.4e-165 583.9 416 69.7
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.6e-164 583.2 416 69.7
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 8.8e-163 577.4 417 69.3
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 2.0e-162 576.2 417 69.1
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 3.4e-162 575.5 419 69.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.1e-160 568.9 423 70.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 4.1e-160 568.5 417 68.1
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 2.7e-159 565.8 423 69.7
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 3.8e-158 562.0 425 68.2
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.0e-158 561.6 419 67.8
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.5e-157 559.3 426 66.9
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 2.5e-157 559.3 429 66.9
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 3.2e-157 558.9 420 68.8
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.2e-157 558.5 419 67.5
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.6e-156 556.6 427 67.4
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.1e-156 556.2 417 66.4
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 6.1e-156 554.7 418 67.7
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 6.1e-156 554.7 411 67.2
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.4e-155 553.5 418 67.9
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.2e-154 550.4 426 67.8
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.6e-154 549.3 426 67.4
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 2.6e-154 549.3 417 67.1
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.7e-154 548.1 426 66.4
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.3e-153 547.0 426 66.9
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.7e-153 546.6 418 67.2
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.2e-153 546.2 452 63.3
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 3.7e-153 545.4 426 66.7
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 4.9e-153 545.0 418 67.5
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 6.3e-153 544.7 426 66.4
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 6.3e-153 544.7 418 67.2
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.4e-152 541.6 426 65.0
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 4.5e-151 538.5 416 66.6
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.0e-150 537.3 422 66.1
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.0e-150 537.3 423 66.4
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.3e-150 537.0 429 65.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.7e-150 536.6 419 67.3
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.3e-150 536.2 417 67.1
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 6.6e-150 534.6 423 65.7
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 6.6e-150 534.6 416 66.6
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.9e-149 533.1 416 66.3
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.3e-149 532.3 416 67.3
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 7.3e-149 531.2 421 66.3
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 7.3e-149 531.2 416 65.4
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.2e-148 530.4 416 65.4
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 3.6e-148 528.9 424 63.7
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 8.0e-148 527.7 421 64.1
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.0e-147 527.3 416 65.1
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.0e-147 527.3 419 64.9
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 2.0e-146 523.1 417 66.4
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.4e-146 521.9 418 67.0
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.4e-146 521.9 418 67.0
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.7e-145 520.0 415 65.5
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 2.9e-145 519.2 418 66.5
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.1e-144 517.3 418 64.4
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.4e-144 516.9 416 65.1
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 2.0e-143 513.1 422 62.6
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.0e-142 510.8 421 64.4
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 1.6e-140 503.4 426 62.2
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 2.2e-137 493.0 423 61.5
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.0e-134 482.6 426 60.1
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 6.6e-134 481.5 426 59.4
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 8.1e-132 474.6 420 60.0
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 4.4e-130 468.8 419 59.9
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 6.4e-129 464.9 423 59.1
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 4.1e-128 462.2 417 61.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.6e-127 460.3 417 60.9
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 4.6e-127 458.8 424 57.8
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 7.8e-127 458.0 416 61.1
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.9e-126 455.7 412 59.0
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 3.9e-126 455.7 416 59.9
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.5e-125 453.8 385 62.1
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.4e-123 447.2 416 57.7
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.3e-123 446.4 407 59.7
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 6.8e-123 444.9 403 59.6
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 2.6e-122 443.0 408 59.6
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.9e-120 436.8 488 51.8
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.2e-119 434.1 367 60.8
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.7e-118 430.3 416 59.4
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 2.4e-115 419.9 416 55.0
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 4.6e-111 405.6 260 80.0
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.1e-104 384.4 259 75.3
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.0e-102 377.9 464 46.6
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.1e-99 367.9 349 58.2
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 5.8e-98 362.1 245 74.3
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 2.2e-89 333.6 468 41.9
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.6e-87 327.4 269 64.7
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.1e-85 321.2 428 45.6
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 9.6e-85 318.2 254 65.7
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.3e-81 307.8 421 45.4
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.4e-80 304.3 463 42.8
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.7e-68 264.2 435 40.0
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.1e-64 251.5 387 42.1
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.1e-63 247.3 186 69.4
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.7e-41 174.5 165 50.3
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.6e-31 141.4 478 27.8
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 2.8e-31 140.6 191 45.0
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.3e-30 137.5 179 44.1
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 8.9e-30 135.6 499 24.0
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 9.8e-29 132.1 463 28.7
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 7.8e-26 122.5 107 55.1
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.6e-23 114.8 70 77.1
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.8e-22 111.3 98 58.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 5.4e-19 99.8 108 46.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 5.4e-11 73.2 106 41.5


User provided reference genes

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