Gene: AT3G19580
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G19580
- Transcript Identifier AT3G19580.1
- Gene Type Coding gene
- Location Chr3 : 6803293-6804114 : negative
Gene Family Information
- ID HOM05D000174
- #Genes/#Species 2155/94
- Phylogenetic origin
- ID ORTHO05D000630
- #Genes/#Species 726/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G19580.1
- symbol ZF2
- Alias AZF2,zinc-finger protein 2
- uniprot Q9SSW2
Descriptions
- Description zinc-finger protein 2
- Computational description zinc-finger protein 2 (ZF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: salt tolerance zinc finger (TAIR:AT1G27730.1); Has 3838 Blast hits to 3100 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 2857; Fungi - 6; Plants - 884; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | IMP, IEP | Gene Ontology | response to abscisic acid | 1 2 |
| GO:0009738 | IEA | GOA Database | abscisic acid-activated signaling pathway | |
| GO:0010200 | IEP | GOA Database | response to chitin | |
| GO:0010200 | IBA | Gene Ontology | response to chitin | 3 |
| GO:0006950 | IBA | Gene Ontology | response to stress | 3 |
| GO:0045892 | IDA | Gene Ontology | negative regulation of transcription, DNA-templated | 4 |
| GO:0042538 | IEP | Gene Ontology | hyperosmotic salinity response | 1 |
| GO:0009793 | IEP | Gene Ontology | embryo development ending in seed dormancy | 1 |
| GO:0009414 | IEP | Gene Ontology | response to water deprivation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 5 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | ISS | Gene Ontology | DNA binding | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 6 |
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISS, ISM | Gene Ontology | nucleus | 1 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |