Gene: AT3G19260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G19260
  • Transcript Identifier AT3G19260.1
  • Gene Type Coding gene
  • Location Chr3 : 6669448-6671257 : negative

Gene Family Information

  • ID HOM05D001394
  • #Genes/#Species 450/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G19260.1
  • symbol LOH2
  • Alias LAG1 HOMOLOG 2,LONGEVITY ASSURANCE GENE1 HOMOLOG 2
  • uniprot Q9LJK3

Descriptions

  • Description LAG1 homologue 2
  • Computational description LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046513
IEA
GOA Databaseceramide biosynthetic process
GO:0046513
IDA
IBA
Gene Ontologyceramide biosynthetic process1 2
GO:0046513
IEA
InterProceramide biosynthetic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0042759
IMP
Gene Ontologylong-chain fatty acid biosynthetic process1
GO:0006665
IDA
Gene Ontologysphingolipid metabolic process1
GO:0002238
IMP
Gene Ontologyresponse to molecule of fungal origin3
GO:0010256
ISS
Gene Ontologyendomembrane system organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016410
IBA
Gene OntologyN-acyltransferase activity2
GO:0050291
IEA
GOA Databasesphingosine N-acyltransferase activity
GO:0050291
IMP
IBA
Gene Ontologysphingosine N-acyltransferase activity1 2
GO:0050291
IEA
InterProsphingosine N-acyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
IBA
Gene Ontologyendoplasmic reticulum2 4
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005634
ISM
Gene Ontologynucleus
GO:0005794
IDA
Gene OntologyGolgi apparatus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006634 TRAM/LAG1/CLN8 homology domain
IPR016439 Sphingosine N-acyltransferase Lag1/Lac1-like
Mapman id Description
5.4.6 Lipid metabolism.sphingolipid biosynthesis.ceramide synthase (LOH)