Gene: AT3G18020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18020
  • Transcript Identifier AT3G18020.1
  • Gene Type Coding gene
  • Location Chr3 : 6165449-6167515 : positive

Gene Family Information

  • ID HOM05D006707
  • #Genes/#Species 120/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18020.1
  • uniprot Q9LSK8

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein
  • Computational description Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 37088 Blast hits to 10596 proteins in 228 species: Archae - 2; Bacteria - 22; Metazoa - 80; Fungi - 314; Plants - 35806; Viruses - 0; Other Eukaryotes - 864 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.58 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (PPME)