Gene: AT3G17760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G17760
  • Transcript Identifier AT3G17760.2
  • Gene Type Coding gene
  • Location Chr3 : 6078893-6080838 : negative

Gene Family Information

  • ID HOM05D001138
  • #Genes/#Species 543/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G17760.2
  • symbol GAD5
  • uniprot Q9LSH2

Descriptions

  • Description glutamate decarboxylase 5
  • Computational description glutamate decarboxylase 5 (GAD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2878 Blast hits to 2874 proteins in 881 species: Archae - 194; Bacteria - 1723; Metazoa - 150; Fungi - 353; Plants - 275; Viruses - 5; Other Eukaryotes - 178 (source: NCBI BLink).
  • Computational description glutamate decarboxylase 5 (GAD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2878 Blast hits to 2874 proteins in 881 species: Archae - 194; Bacteria - 1723; Metazoa - 150; Fungi - 353; Plants - 275; Viruses - 5; Other Eukaryotes - 178 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009448
ISO
PLAZA Integrative Orthologygamma-aminobutyric acid metabolic process Solyc03g098240.3
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0006536
IEA
GOA Databaseglutamate metabolic process
GO:0006536
IEA
InterProglutamate metabolic process
GO:0006538
IBA
Gene Ontologyglutamate catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0030170
IEA
Gene Ontologypyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0004351
IEA
GOA Databaseglutamate decarboxylase activity
GO:0004351
IBA
Gene Ontologyglutamate decarboxylase activity1
GO:0004351
IEA
InterProglutamate decarboxylase activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma2
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010107 Glutamate decarboxylase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR002129 Pyridoxal phosphate-dependent decarboxylase
Mapman id Description
4.1.1.1.3.1 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase