Gene: AT3G14790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G14790
  • Transcript Identifier AT3G14790.2
  • Gene Type Coding gene
  • Location Chr3 : 4964782-4966875 : positive

Gene Family Information

  • ID HOM05D001036
  • #Genes/#Species 585/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G14790.2
  • symbol RHM3
  • Alias ATRHM3,ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 3
  • uniprot Q9LH76

Descriptions

  • Description rhamnose biosynthesis 3
  • Computational description rhamnose biosynthesis 3 (RHM3); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT1G53500.1); Has 53605 Blast hits to 53390 proteins in 3033 species: Archae - 947; Bacteria - 30692; Metazoa - 1095; Fungi - 569; Plants - 1514; Viruses - 102; Other Eukaryotes - 18686 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010253
IDA
IBA
Gene OntologyUDP-rhamnose biosynthetic process1 2
GO:0009225
IEA
Gene Ontologynucleotide-sugar metabolic process
GO:0009225
IEA
InterPronucleotide-sugar metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0010315
IBA
Gene Ontologyauxin efflux2
GO:0051555
IBA
Gene Ontologyflavonol biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008460
IEA
Gene OntologydTDP-glucose 4,6-dehydratase activity
GO:0008460
IEA
InterProdTDP-glucose 4,6-dehydratase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0050377
IEA
GOA DatabaseUDP-glucose 4,6-dehydratase activity
GO:0050377
IBA
Gene OntologyUDP-glucose 4,6-dehydratase activity2
GO:0010280
IDA
ISS, IBA
Gene OntologyUDP-L-rhamnose synthase activity1 2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol5
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
IPR029903 RmlD-like substrate binding domain
IPR005888 dTDP-glucose 4,6-dehydratase
Mapman id Description
3.13.6.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.nucleotide rhamnose biosynthesis.UDP-L-rhamnose synthase (RHM)