Gene: AT3G13960
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G13960
- Transcript Identifier AT3G13960.1
- Gene Type Coding gene
- Location Chr3 : 4608526-4610160 : positive
Gene Family Information
- ID HOM05D000375
- #Genes/#Species 1299/96
- Phylogenetic origin
- ID ORTHO05D000240
- #Genes/#Species 1293/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G13960.1
- symbol GRF5
- Alias AtGRF5,growth-regulating factor 5
- uniprot Q8L8A6
Descriptions
- Description growth-regulating factor 5
- Computational description growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | Os02g0701300 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Zm00001eb251820 |
| GO:0008283 | ISO | PLAZA Integrative Orthology | cell population proliferation | Zm00001eb320200 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0032502 | IEA | GOA Database | developmental process | |
| GO:0032502 | IEA | InterPro | developmental process | |
| GO:0006351 | IEA | Gene Ontology | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0009739 | IMP, IEP | Gene Ontology | response to gibberellin | 1 |
| GO:0009409 | IEP | Gene Ontology | response to cold | 1 |
| GO:0048366 | IMP TAS | Gene Ontology | leaf development | 2 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | Gene Ontology | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISS | Gene Ontology | nucleus | 2 |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.50.1 | RNA biosynthesis.transcriptional regulation.GRF-GIF transcription factor complex.component GRF |