Gene: AT3G13840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13840
  • Transcript Identifier AT3G13840.1
  • Gene Type Coding gene
  • Location Chr3 : 4555305-4556837 : negative

Gene Family Information

  • ID HOM05D000063
  • #Genes/#Species 3996/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13840.1
  • uniprot Q9LRW3

Descriptions

  • Description GRAS family transcription factor
  • Computational description GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2103 Blast hits to 2091 proteins in 270 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:2000032
IEA
GOA Databaseregulation of secondary shoot formation
GO:0042446
IEA
GOA Databasehormone biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005202 Transcription factor GRAS
IPR030015 Scarecrow-like protein 29/nodulation signalling pathway 1
Mapman id Description
15.5.12 RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)
26.10.1.6.1 External stimuli response.symbiont.symbiosis signalling pathway.NSP1-NSP2 nodulation initiation complex.component NSP1